RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 PPP2R5AQ15172 486 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 NAB2Q15742 525 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 MAPK6Q16659 721 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 PLK5Q496M5 336 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 SLC27A1Q6PCB7 646 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 C19orf48Q6RUI8 117 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 MFSD6LQ8IWD5 586 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 PDILTQ8N807 584 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 IQUBQ8NA54 791 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 MLKLQ8NB16 471 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 SMARCD2Q92925 531 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 DHX58Q96C10 678 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 GPSM3Q9Y4H4 160 aa13.57□□□□□ -0.24
SHMT2-230ENST00000557427 NPHP3-ACAD11A0A0J9YXS1 232 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 LNP1A1A4G5 178 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 K7ERI5 159 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 ACKR2O00590 384 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 PTGESO14684 152 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 MICAL2O94851 1124 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 PLA2G4BP0C869 781 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 GJA1P17302 382 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 MYL5Q02045 173 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 E2F4Q16254 413 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 FAM187BQ17R55 369 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 DGKKQ5KSL6 1271 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 CDCA2Q69YH5 1023 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-230ENST00000557427 CD300LGQ6UXG3 332 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 C1orf186Q6ZWK4 172 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 HACE1Q8IYU2 909 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 HS6ST3Q8IZP7 471 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 DEPDC1BQ8WUY9 529 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 PAGE5Q96GU1 130 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 PRIMPOLQ96LW4 560 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 DUSP15Q9H1R2 295 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-230ENST00000557427 TRPV4Q9HBA0 871 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 POLR3BQ9NW08 1133 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-230ENST00000557427 KLK13Q9UKR3 277 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 MSRB2Q9Y3D2 182 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 NEUROG3Q9Y4Z2 214 aa13.56□□□□□ -0.24
SHMT2-230ENST00000557427 MYBPHLA2RUH7 354 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 HEPACAM2A8MVW5 462 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 SPECC1L-ADORA2AF8WAN1 911 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 CDX4O14627 284 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-230ENST00000557427 SEC24AO95486 1093 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 EDN1P05305 212 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 CSRP1P21291 193 aaKnown RBP13.55□□□□□ -0.24
SHMT2-230ENST00000557427 CTHP32929 405 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 NPTX2P47972 431 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 EFNA5P52803 228 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 CACNB1Q02641 598 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-230ENST00000557427 PON2Q15165 354 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 EEF1DP3Q658K8 133 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 PDXDC1Q6P996 788 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-230ENST00000557427 PDZD3Q86UT5 571 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 DAW1Q8N136 415 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 SYT2Q8N9I0 419 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-230ENST00000557427 SPC24Q8NBT2 197 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 TTC8Q8TAM2 541 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 ZSCAN18Q8TBC5 510 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-230ENST00000557427 CALML4Q96GE6 196 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 AK8Q96MA6 479 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 GSDMAQ96QA5 445 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 CCDC113Q9H0I3 377 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 PDZD7Q9H5P4 517 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 KMT5AQ9NQR1 393 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 SNTG2Q9NY99 539 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 BACE2Q9Y5Z0 518 aa13.55□□□□□ -0.24
SHMT2-230ENST00000557427 CELSR3Q9NYQ7 3312 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 MAST4O15021 2626 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 CCDC163A0A0D9SF12 145 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 N4BP3O15049 544 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 SLC16A4O15374 487 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 ABLIM3O94929 683 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 BMP6P22004 513 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 KPNA1P52294 538 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-230ENST00000557427 DPYDQ12882 1025 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 HYIQ5T013 277 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 DAB2IPQ5VWQ8 1189 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 PROSER1Q86XN7 944 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 ZNF461Q8TAF7 563 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 CSGALNACT1Q8TDX6 532 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 DDX27Q96GQ7 796 aaKnown RBP13.54□□□□□ -0.24
SHMT2-230ENST00000557427 MSANTD3Q96H12 275 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 DRC1Q96MC2 740 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 LRRC3BQ96PB8 259 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 C8orf33Q9H7E9 229 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-230ENST00000557427 GDAQ9Y2T3 454 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 ZMYM2Q9UBW7 1377 aa13.54□□□□□ -0.24
SHMT2-230ENST00000557427 BCLAF3A2AJT9 711 aaKnown RBP13.53□□□□□ -0.24
SHMT2-230ENST00000557427 ZNF197O14709 1029 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 DCLK1O15075 740 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 CHADO15335 359 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms