RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 ZACNQ401N2 412 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 SLC39A12Q504Y0 691 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 ZCWPW2Q504Y3 356 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 WDR44Q5JSH3 913 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 TMEM31Q5JXX7 168 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 LMBRD2Q68DH5 695 aaPredicted RBP8.41□□□□□ -1.06
PSEN1-222ENST00000557356 KRT39Q6A163 491 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 ANKRD40Q6AI12 368 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 VSTM1Q6UX27 236 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 PDZD4Q76G19 769 aaPredicted RBP8.41□□□□□ -1.06
PSEN1-222ENST00000557356 SV2AQ7L0J3 742 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 LIMS2Q7Z4I7 341 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 FILIP1Q7Z7B0 1213 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 MLKLQ8NB16 471 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 ATAD1Q8NBU5 361 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 OR6B3Q8NGW1 331 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 FAM200AQ8TCP9 573 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 ZNF516Q92618 1163 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 E2F7Q96AV8 911 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 GCNAQ96QF7 691 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 CORO1BQ9BR76 489 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 TMEM8AQ9HCN3 771 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 ASAH2Q9NR71 780 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 DNMT3BQ9UBC3 853 aaKnown RBP8.41□□□□□ -1.06
PSEN1-222ENST00000557356 ARMCX3Q9UH62 379 aaPredicted RBP8.41□□□□□ -1.06
PSEN1-222ENST00000557356 MAN1B1Q9UKM7 699 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 TRIP11Q15643 1979 aa8.41□□□□□ -1.06
PSEN1-222ENST00000557356 ATP8B3O60423 1300 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 LRRIQ3A6PVS8 624 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 A8MXQ7 604 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 PRR33A8MZF0 331 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 N4BP1O75113 896 aaKnown RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 CSH1P0DML2 217 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 CSH2P0DML3 217 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 HAPLN1P10915 354 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 CDC25CP30307 473 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 PIK3CAP42336 1068 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 MAGEA11P43364 429 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 EPHA5P54756 1037 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 MYL6P60660 151 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 SIGLEC14Q08ET2 396 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 MORC3Q14149 939 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 CFAP221Q4G0U5 840 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 ARHGAP15Q53QZ3 475 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 CT47A1Q5JQC4 288 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 INTS6LQ5JSJ4 861 aaKnown RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 FAM171BQ6P995 826 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 BMP8AQ7Z5Y6 402 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 FRMD5Q7Z6J6 570 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 DNAJB7Q7Z6W7 309 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 UNC93AQ86WB7 457 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 SPATA2LQ8IUW3 424 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 OR10T2Q8NGX3 314 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 FGF13Q92913 245 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 PSMG2Q969U7 264 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 PGLYRP2Q96PD5 576 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 KCNK12Q9HB15 430 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 CYP3A43Q9HB55 503 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 MAGEC2Q9UBF1 373 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 UXTQ9UBK9 157 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 NXF1Q9UBU9 619 aaKnown RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 DACH1Q9UI36 760 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 MUTYHQ9UIF7 546 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 L1RE1Q9UN81 338 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 SLC27A5Q9Y2P5 690 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 YIPF1Q9Y548 306 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 TCF20Q9UGU0 1960 aaKnown RBP8.4□□□□□ -1.06
PSEN1-222ENST00000557356 ATG2AQ2TAZ0 1938 aa8.4□□□□□ -1.06
PSEN1-222ENST00000557356 PTPRJQ12913 1337 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 ANHXE9PGG2 379 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 ASS1P00966 412 aaKnown RBP8.39□□□□□ -1.07
PSEN1-222ENST00000557356 OR4Q2P0C623 313 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 CCDC192P0DO97 292 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 PTPN1P18031 435 aaKnown RBP8.39□□□□□ -1.07
PSEN1-222ENST00000557356 SP100P23497 879 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-222ENST00000557356 PPP3CCP48454 512 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 YWHAEP62258 255 aaKnown RBP8.39□□□□□ -1.07
PSEN1-222ENST00000557356 PFKPQ01813 784 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 PAK1Q13153 545 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 CCDC40Q4G0X9 1142 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 TCERG1LQ5VWI1 586 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 TDRD10Q5VZ19 366 aaKnown RBP8.39□□□□□ -1.07
PSEN1-222ENST00000557356 TRIM67Q6ZTA4 783 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 GET4Q7L5D6 327 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-222ENST00000557356 LRRTM3Q86VH5 581 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 ZC3H3Q8IXZ2 948 aaKnown RBP8.39□□□□□ -1.07
PSEN1-222ENST00000557356 SMYD4Q8IYR2 804 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-222ENST00000557356 FBXL13Q8NEE6 735 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 NELFBQ8WX92 580 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 SEPT5Q99719 369 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-222ENST00000557356 RTP3Q9BQQ7 232 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 SYT15Q9BQS2 421 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 XYLT2Q9H1B5 865 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 NUP62CLQ9H1M0 184 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 EPHX3Q9H6B9 360 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 ZFP14Q9HCL3 533 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 WNT16Q9UBV4 365 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 GTF3C4Q9UKN8 822 aa8.39□□□□□ -1.07
PSEN1-222ENST00000557356 PDCD11Q14690 1871 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms