RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 FAM109AQ8N4B1 249 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 CAMKK1Q8N5S9 505 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 DDB2Q92466 427 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 TNPO1Q92973 898 aaKnown RBP5.48□□□□□ -1.53
VRK1-207ENST00000557352 RGMAQ96B86 450 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 SIK2Q9H0K1 926 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 MRPL46Q9H2W6 279 aaKnown RBP5.48□□□□□ -1.53
VRK1-207ENST00000557352 WDCPQ9H6R7 721 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 RAD54BQ9Y620 910 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 DTNBO60941 627 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 SNUPNO95149 360 aaKnown RBP5.47□□□□□ -1.53
VRK1-207ENST00000557352 ZFXP17010 805 aaPredicted RBP5.47□□□□□ -1.53
VRK1-207ENST00000557352 DRD4P21917 467 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 CD6P30203 668 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 BOP1Q14137 746 aaKnown RBP5.47□□□□□ -1.53
VRK1-207ENST00000557352 TBCCQ15814 346 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 VPS53Q5VIR6 699 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 FAM136AQ96C01 138 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 SLC29A3Q9BZD2 475 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 SERTAD4Q9NUC0 356 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 RNF7Q9UBF6 113 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 FEZ2Q9UHY8 353 aaPredicted RBP5.47□□□□□ -1.53
VRK1-207ENST00000557352 PADI4Q9UM07 663 aa5.47□□□□□ -1.53
VRK1-207ENST00000557352 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 FTLP02792 175 aaPredicted RBP5.46□□□□□ -1.54
VRK1-207ENST00000557352 CELA2AP08217 269 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 POU2F2P09086 479 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 EBLN1P0CF75 366 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 PCSK6P29122 969 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 GCLCP48506 637 aaPredicted RBP5.46□□□□□ -1.54
VRK1-207ENST00000557352 CCT8P50990 548 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 TFF2Q03403 129 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 BMPR2Q13873 1038 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 PLAC9Q5JTB6 97 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 PPP1R3BQ86XI6 285 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 SERHLQ9NQF3 203 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.46□□□□□ -1.54
VRK1-207ENST00000557352 LMBRD1Q9NUN5 540 aa5.46□□□□□ -1.54
VRK1-207ENST00000557352 M0QYG6 137 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 AHSGP02765 367 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 GNAI2P04899 355 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 HNRNPCP07910 306 aaKnown RBP eCLIP5.45□□□□□ -1.54
VRK1-207ENST00000557352 TYRP14679 529 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 JUPP14923 745 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 MAP2K6P52564 334 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 TMEM240Q5SV17 173 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 KIAA1614Q5VZ46 1190 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 ZNF551Q7Z340 670 aaPredicted RBP5.45□□□□□ -1.54
VRK1-207ENST00000557352 CPA6Q8N4T0 437 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 SEMA6DQ8NFY4 1073 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 KLHDC4Q8TBB5 520 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 DDX17Q92841 729 aaKnown RBP5.45□□□□□ -1.54
VRK1-207ENST00000557352 PCDH12Q9NPG4 1184 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 COL4A3BPQ9Y5P4 624 aa5.45□□□□□ -1.54
VRK1-207ENST00000557352 LINC01548A6NM66 108 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 PPM1DO15297 605 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 PDHA1P08559 390 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 EIF2B5Q13144 721 aaKnown RBP5.44□□□□□ -1.54
VRK1-207ENST00000557352 FAM160B1Q5W0V3 765 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 SUMO4Q6EEV6 95 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 TMEM108Q6UXF1 575 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 C1QL2Q7Z5L3 287 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 CATIPQ7Z7H3 387 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 FAM46DQ8NEK8 389 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 ATRIPQ8WXE1 791 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 SMG7Q92540 1137 aaKnown RBP5.44□□□□□ -1.54
VRK1-207ENST00000557352 FAM167AQ96KS9 214 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 ZNF778Q96MU6 729 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 C1QTNF7Q9BXJ2 289 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 ARHGEF3Q9NR81 526 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 PNPOQ9NVS9 261 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 FLRT1Q9NZU1 646 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 SERGEFQ9UGK8 458 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 PCDHA1Q9Y5I3 950 aa5.44□□□□□ -1.54
VRK1-207ENST00000557352 WDR91A4D1P6 747 aa5.43□□□□□ -1.54
VRK1-207ENST00000557352 TARM1B6A8C7 271 aa5.43□□□□□ -1.54
VRK1-207ENST00000557352 NXPH3O95157 252 aa5.43□□□□□ -1.54
VRK1-207ENST00000557352 ZNF81P51508 661 aa5.43□□□□□ -1.54
VRK1-207ENST00000557352 SLC10A2Q12908 348 aaPredicted RBP5.43□□□□□ -1.54
VRK1-207ENST00000557352 LLGL1Q15334 1064 aa5.43□□□□□ -1.54
VRK1-207ENST00000557352 PGS1Q32NB8 556 aa5.43□□□□□ -1.54
VRK1-207ENST00000557352 TMEM119Q4V9L6 283 aa5.43□□□□□ -1.54
VRK1-207ENST00000557352 ZNF782Q6ZMW2 699 aaPredicted RBP5.43□□□□□ -1.54
VRK1-207ENST00000557352 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.43□□□□□ -1.54
VRK1-207ENST00000557352 SCARB1Q8WTV0 552 aa5.43□□□□□ -1.54
VRK1-207ENST00000557352 NELL2Q99435 816 aa5.43□□□□□ -1.54
VRK1-207ENST00000557352 GTPBP4Q9BZE4 634 aaKnown RBP5.43□□□□□ -1.54
VRK1-207ENST00000557352 IL33O95760 270 aa5.42□□□□□ -1.54
VRK1-207ENST00000557352 FAM163BP0C2L3 166 aa5.42□□□□□ -1.54
VRK1-207ENST00000557352 PIM1P11309 404 aaPredicted RBP5.42□□□□□ -1.54
VRK1-207ENST00000557352 NDUFB7P17568 137 aa5.42□□□□□ -1.54
VRK1-207ENST00000557352 ZNF134P52741 427 aa5.42□□□□□ -1.54
VRK1-207ENST00000557352 EXOSC9Q06265 439 aaKnown RBP5.42□□□□□ -1.54
VRK1-207ENST00000557352 GRM1Q13255 1194 aa5.42□□□□□ -1.54
VRK1-207ENST00000557352 SRSF7Q16629 238 aaKnown RBP eCLIP5.42□□□□□ -1.54
VRK1-207ENST00000557352 BRDTQ58F21 947 aaPredicted RBP5.42□□□□□ -1.54
VRK1-207ENST00000557352 ZNF618Q5T7W0 954 aa5.42□□□□□ -1.54
VRK1-207ENST00000557352 TEDDM1Q5T9Z0 273 aa5.42□□□□□ -1.54
VRK1-207ENST00000557352 DTX2Q86UW9 622 aa5.42□□□□□ -1.54
VRK1-207ENST00000557352 HSPBAP1Q96EW2 488 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms