RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 USP39Q53GS9 565 aaKnown RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 NT5DC4Q86YG4 428 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 CPA6Q8N4T0 437 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 KIAA1958Q8N8K9 716 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 SYT2Q8N9I0 419 aaPredicted RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 FAM184AQ8NB25 1140 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 MRPS31Q92665 395 aaKnown RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 CDK5RAP3Q96JB5 506 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 ZFYVE19Q96K21 471 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 ZBTB45Q96K62 511 aaPredicted RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 LRRC3BQ96PB8 259 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 RUSC1Q9BVN2 902 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 SLC46A2Q9BY10 475 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 ZCWPW1Q9H0M4 648 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 POLD4Q9HCU8 107 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 SH2B1Q9NRF2 756 aaPredicted RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 ODF2LQ9ULJ1 636 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 LIMCH1Q9UPQ0 1083 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 C2CD2Q9Y426 696 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 KIF3AQ9Y496 699 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 TIMM13Q9Y5L4 95 aaPredicted RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 NCANO14594 1321 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 BCLAF3A2AJT9 711 aaKnown RBP11.05□□□□□ -0.64
RDH11-210ENST00000557331 LACTBL1A8MY62 500 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 E9PMD0 336 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 PIRO00625 290 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 KHNYNO15037 678 aaKnown RBP11.05□□□□□ -0.64
RDH11-210ENST00000557331 PIGRP01833 764 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 OR4Q2P0C623 313 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 CSH1P0DML2 217 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 CSH2P0DML3 217 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 RDXP35241 583 aaKnown RBP11.05□□□□□ -0.64
RDH11-210ENST00000557331 TNK2Q07912 1038 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 WDR44Q5JSH3 913 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 HYIQ5T013 277 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 STXBP5Q5T5C0 1151 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 SLFN12LQ6IEE8 588 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 UNQ6494/PRO21346Q6UXR6 183 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 MON1AQ86VX9 555 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 ATP2A3Q93084 1043 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
RDH11-210ENST00000557331 SEPT5Q99719 369 aaPredicted RBP11.05□□□□□ -0.64
RDH11-210ENST00000557331 P2RY13Q9BPV8 354 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 CCSER1Q9C0I3 900 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 CRISPLD1Q9H336 500 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 RXFP3Q9NSD7 469 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 PCNX2A6NKB5 2137 aa11.05□□□□□ -0.64
RDH11-210ENST00000557331 PKD1L2Q7Z442 2459 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 SFI1A8K8P3 1242 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 MEFVO15553 781 aaPredicted RBP11.04□□□□□ -0.64
RDH11-210ENST00000557331 RNF40O75150 1001 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 PRAMEF12O95522 483 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 HAPLN1P10915 354 aaPredicted RBP11.04□□□□□ -0.64
RDH11-210ENST00000557331 PFKLP17858 780 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 PNPLA4P41247 253 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 TAF6P49848 677 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 NOVA1P51513 510 aaKnown RBP11.04□□□□□ -0.64
RDH11-210ENST00000557331 NCKAP1LP55160 1127 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 NLRP12P59046 1061 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 RPL10AP62906 217 aaKnown RBP11.04□□□□□ -0.64
RDH11-210ENST00000557331 TSPY1Q01534 308 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 CREB5Q02930 508 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 LMAN2Q12907 356 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 BYSLQ13895 437 aaKnown RBP11.04□□□□□ -0.64
RDH11-210ENST00000557331 TMEM132DQ14C87 1099 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 ENOX2Q16206 610 aaKnown RBP11.04□□□□□ -0.64
RDH11-210ENST00000557331 SLC39A12Q504Y0 691 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 SPDYCQ5MJ68 293 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 C9orf57Q5W0N0 161 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 LMBRD2Q68DH5 695 aaPredicted RBP11.04□□□□□ -0.64
RDH11-210ENST00000557331 FSTL4Q6MZW2 842 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 PSAPL1Q6NUJ1 521 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 FSIP1Q8NA03 581 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 TTC8Q8TAM2 541 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 SPATA18Q8TC71 538 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 CEP295NLQ96MC4 621 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 MSTO1Q9BUK6 570 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 EDEM2Q9BV94 578 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 DUSP15Q9H1R2 295 aaPredicted RBP11.04□□□□□ -0.64
RDH11-210ENST00000557331 TMEM206Q9H813 350 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 IL21Q9HBE4 155 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 ABCB6Q9NP58 842 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 TMEM9BQ9NQ34 198 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 C2orf42Q9NWW7 574 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 TBX20Q9UMR3 447 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 PCDHB5Q9Y5E4 795 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 GON4LQ3T8J9 2241 aa11.04□□□□□ -0.64
RDH11-210ENST00000557331 MYH11P35749 1972 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 A0A0B4J269 797 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 ANO9A1A5B4 782 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 C4orf47A7E2U8 309 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 CYB561D2O14569 222 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 ALDH1A2O94788 518 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 F11P03951 625 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 GALK1P51570 392 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 FOSBP53539 338 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 GUCY1B3Q02153 619 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 FAM160A1Q05DH4 1040 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 HSF5Q4G112 596 aaPredicted RBP11.03□□□□□ -0.64
RDH11-210ENST00000557331 RILPL1Q5EBL4 403 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms