RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 KRT36O76013 467 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 LYNP07948 512 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 FAM86B2P0C5J1 330 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 RARBP10826 455 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 CRABP2P29373 138 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 CYP2J2P51589 502 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 STAT2P52630 851 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 CDK16Q00536 496 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 CDK18Q07002 472 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 PPP2R5CQ13362 524 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 HNRNPDQ14103 355 aaKnown RBP13.23□□□□□ -0.29
APEX1-216ENST00000557159 COG2Q14746 738 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 MORF4L2Q15014 288 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 PLEKHG4Q58EX7 1191 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 COL13A1Q5TAT6 717 aaPredicted RBP13.23□□□□□ -0.29
APEX1-216ENST00000557159 NET1Q7Z628 596 aaPredicted RBP13.23□□□□□ -0.29
APEX1-216ENST00000557159 DHX37Q8IY37 1157 aaKnown RBP13.23□□□□□ -0.29
APEX1-216ENST00000557159 C9orf72Q96LT7 481 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 CENPKQ9BS16 269 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 C17orf75Q9HAS0 396 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 GPAMQ9HCL2 828 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 IRAK4Q9NWZ3 460 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 ZDHHC7Q9NXF8 308 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 NDUFA13Q9P0J0 144 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 SSX2IPQ9Y2D8 614 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 TMX2Q9Y320 296 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 COQ4Q9Y3A0 265 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 EIF4E1BA6NMX2 242 aaKnown RBP13.23□□□□□ -0.29
APEX1-216ENST00000557159 GDF11O95390 407 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 CYP11B1P15538 503 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 TSHRP16473 764 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 KRT15P19012 456 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 MAPK4P31152 587 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 CDK7P50613 346 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 CLCN2P51788 898 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 ENPEPQ07075 957 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 LSAMPQ13449 338 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 PKN2Q16513 984 aaKnown RBP13.23□□□□□ -0.29
APEX1-216ENST00000557159 TRMT5Q32P41 509 aaKnown RBP13.23□□□□□ -0.29
APEX1-216ENST00000557159 LVRNQ6Q4G3 990 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 CDAN1Q8IWY9 1227 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 KATNAL2Q8IYT4 538 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 DDX1Q92499 740 aaKnown RBP13.23□□□□□ -0.29
APEX1-216ENST00000557159 MCUR1Q96AQ8 359 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 DHRS4Q9BTZ2 278 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 GLIS2Q9BZE0 524 aaPredicted RBP13.23□□□□□ -0.29
APEX1-216ENST00000557159 EHMT1Q9H9B1 1298 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 TAS2R1Q9NYW7 299 aa13.23□□□□□ -0.29
APEX1-216ENST00000557159 ADM5C9JUS6 153 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 CSDE1O75534 798 aaKnown RBP13.22□□□□□ -0.29
APEX1-216ENST00000557159 TOMM70O94826 608 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 SLITRK3O94933 977 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 PABPC4LP0CB38 370 aaKnown RBP13.22□□□□□ -0.29
APEX1-216ENST00000557159 SERPINB4P48594 390 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 APLP1P51693 650 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 XIAPP98170 497 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 PPP3CAQ08209 521 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 CNPY1Q3B7I2 92 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 WDR72Q3MJ13 1102 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 PRAMEF18Q5VWM3 479 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 PCNX4Q63HM2 1172 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 ZNF746Q6NUN9 644 aaPredicted RBP13.22□□□□□ -0.29
APEX1-216ENST00000557159 CCDC62Q6P9F0 684 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 DLK2Q6UY11 383 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 CPNE8Q86YQ8 564 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 VPS52Q8N1B4 723 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 EXD1Q8NHP7 514 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 ATG4AQ8WYN0 398 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 PPP2R3CQ969Q6 453 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 BTBD6Q96KE9 485 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 KREMEN1Q96MU8 473 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 NACC1Q96RE7 527 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 NDNQ99608 321 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 NPHS2Q9NP85 383 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 ARL8BQ9NVJ2 186 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 CHCHD3Q9NX63 227 aaKnown RBP13.22□□□□□ -0.29
APEX1-216ENST00000557159 SHOC2Q9UQ13 582 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 DRG1Q9Y295 367 aaKnown RBP13.22□□□□□ -0.29
APEX1-216ENST00000557159 GMEB1Q9Y692 573 aa13.22□□□□□ -0.29
APEX1-216ENST00000557159 SMAPO00193 183 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 KLF11O14901 512 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 ATP2A1O14983 1001 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
APEX1-216ENST00000557159 FAM155BO75949 473 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 ITGBL1O95965 494 aaPredicted RBP13.21□□□□□ -0.29
APEX1-216ENST00000557159 DHRS4L1P0CG22 281 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 FGFR1P11362 822 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 LIN52Q52LA3 116 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 OTOP1Q7RTM1 612 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 FAM160B2Q86V87 743 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 LCA5Q86VQ0 697 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 ZNF677Q86XU0 584 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 TMPRSS6Q8IU80 811 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 TNS4Q8IZW8 715 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.21□□□□□ -0.29
APEX1-216ENST00000557159 SLC5A5Q92911 643 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 HERPUD2Q9BSE4 406 aa13.21□□□□□ -0.29
APEX1-216ENST00000557159 ST6GALNAC4Q9H4F1 302 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms