RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TRPV2Q9Y5S1 764 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CA12O43570 354 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 ATP1A2P50993 1020 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 PDIA2Q13087 525 aaKnown RBP12.5□□□□□ -0.41
NEK9-210ENST00000557026 PLA2G4FQ68DD2 849 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 ERAP2Q6P179 960 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 TRIM65Q6PJ69 517 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 BBS7Q8IWZ6 715 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 TAF1DQ9H5J8 278 aaPredicted RBP12.5□□□□□ -0.41
NEK9-210ENST00000557026 SPATA31D1Q6ZQQ2 1576 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 NMT2O60551 498 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 MAPK8P45983 427 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 HERVK_113P62684 666 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 IKBKEQ14164 716 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 ZNF544Q6NX49 715 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CCNYL1Q8N7R7 359 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 USP38Q8NB14 1042 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 MAML1Q92585 1016 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 AIFM3Q96NN9 605 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CHST12Q9NRB3 414 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 PSTPIP1O43586 416 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 PIP4K2CQ8TBX8 421 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 KIF17Q9P2E2 1029 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 NOVA2Q9UNW9 492 aaKnown RBP12.49□□□□□ -0.41
NEK9-210ENST00000557026 NWD1Q149M9 1564 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 SOWAHDA6NJG2 315 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 LZTS3O60299 673 aaPredicted RBP12.49□□□□□ -0.41
NEK9-210ENST00000557026 SRGAP2O75044 1071 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 CRTAMO95727 393 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 CYP2C18P33260 490 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 NAA20P61599 178 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 SMARCB1Q12824 385 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 KBTBD12Q3ZCT8 623 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 CCDC137Q6PK04 289 aaKnown RBP12.49□□□□□ -0.41
NEK9-210ENST00000557026 FAM167BQ9BTA0 163 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 LATS2Q9NRM7 1088 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 TTLL13PA6NNM8 815 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 PDHXO00330 501 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 CXCL9Q07325 125 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 GOLGA7BQ2TAP0 167 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 INTS5Q6P9B9 1019 aaKnown RBP12.49□□□□□ -0.41
NEK9-210ENST00000557026 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 SYNDIG1Q9H7V2 258 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 MAN1C1Q9NR34 630 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 GTF3C4Q9UKN8 822 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 FIS1Q9Y3D6 152 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 ENC1O14682 589 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 ATXN3P54252 364 aaPredicted RBP12.49□□□□□ -0.41
NEK9-210ENST00000557026 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 TMC7Q7Z402 723 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 ROPN1BQ9BZX4 212 aaPredicted RBP12.49□□□□□ -0.41
NEK9-210ENST00000557026 GOLPH3Q9H4A6 298 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 ARMC7Q9H6L4 198 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 ROPN1Q9HAT0 212 aaPredicted RBP12.49□□□□□ -0.41
NEK9-210ENST00000557026 PPARGC1AQ9UBK2 798 aaKnown RBP12.49□□□□□ -0.41
NEK9-210ENST00000557026 MAPRE3Q9UPY8 281 aa12.49□□□□□ -0.41
NEK9-210ENST00000557026 RIMS1Q86UR5 1692 aaKnown RBP12.48□□□□□ -0.41
NEK9-210ENST00000557026 PHF2O75151 1096 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 ASS1P00966 412 aaKnown RBP12.48□□□□□ -0.41
NEK9-210ENST00000557026 GUCY2CP25092 1073 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 NMT1P30419 496 aaKnown RBP12.48□□□□□ -0.41
NEK9-210ENST00000557026 NAB2Q15742 525 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 CXorf38Q8TB03 319 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 TBCBQ99426 244 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 GID8Q9NWU2 228 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 CNTNAP5Q8WYK1 1306 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 RSPH10B2B2RC85 870 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 ADCY6O43306 1168 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 KRT8P05787 483 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 RSPH10BP0C881 870 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 HSPA1AP0DMV8 641 aaKnown RBP12.48□□□□□ -0.41
NEK9-210ENST00000557026 HSPA1BP0DMV9 641 aaKnown RBP12.48□□□□□ -0.41
NEK9-210ENST00000557026 CYP2A6P11509 494 aaPredicted RBP12.48□□□□□ -0.41
NEK9-210ENST00000557026 MCL1Q07820 350 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 C2orf54Q08AI8 447 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 TAGAPQ8N103 731 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 PHC3Q8NDX5 983 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 FEZF2Q8TBJ5 459 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 OXER1Q8TDS5 423 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 TMEM237Q96Q45 408 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 UBE2OQ9C0C9 1292 aaKnown RBP12.48□□□□□ -0.41
NEK9-210ENST00000557026 XPNPEP3Q9NQH7 507 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 ATP11BQ9Y2G3 1177 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 ANGPT2O15123 496 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 HAUS5O94927 633 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 CKMP06732 381 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 JAK1P23458 1154 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 PABPC5Q96DU9 382 aaKnown RBP12.48□□□□□ -0.41
NEK9-210ENST00000557026 TAAR1Q96RJ0 339 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 SNTNA6NMZ2 147 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 ARIH2O95376 493 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 CNTFP26441 200 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 TRIP13Q15645 432 aaPredicted RBP12.48□□□□□ -0.41
NEK9-210ENST00000557026 CENPPQ6IPU0 288 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 SGSM3Q96HU1 749 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 WDCPQ9H6R7 721 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms