RNA–Protein interactions for RNA: ENST00000556838.5

RBM23-223, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-223	ENST00000556838	SOWAHA	Q2M3V2	549 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	WDR72	Q3MJ13	1102 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	CYP4A22	Q5TCH4	519 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	TDRD10	Q5VZ19	366 aa	Known RBP	13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	LIMS2	Q7Z4I7	341 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	UBALD2	Q8IYN6	164 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	ATAD1	Q8NBU5	361 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	GBP4	Q96PP9	640 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	VRTN	Q9H8Y1	702 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	HCFC1R1	Q9NWW0	138 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	IGSF9	Q9P2J2	1179 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	CDH7	Q9ULB5	785 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	SORCS3	Q9UPU3	1222 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	MRPS23	Q9Y3D9	190 aa	Known RBP	13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	YIPF1	Q9Y548	306 aa		13.27	□□□□□ -0.29
RBM23-223	ENST00000556838	SLC16A3	O15427	465 aa	Known RBP	13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	TACC1	O75410	805 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	CLSTN1	O94985	981 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	VNN2	O95498	520 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	LAMP2	P13473	410 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	WARS	P23381	471 aa	Known RBP	13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	CCNE1	P24864	410 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	GTF2H1	P32780	548 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	MYL6	P60660	151 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	DLG4	P78352	724 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	NTHL1	P78549	312 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	VEPH1	Q14D04	833 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	MAPRE1	Q15691	268 aa	Known RBP	13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	SGSM1	Q2NKQ1	1148 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	ZNF699	Q32M78	642 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	ZACN	Q401N2	412 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	INTS6L	Q5JSJ4	861 aa	Known RBP	13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	ANKRD40	Q6AI12	368 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	SCARA3	Q6AZY7	606 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	PDZD4	Q76G19	769 aa	Predicted RBP	13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	SV2A	Q7L0J3	742 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	ITIH5	Q86UX2	942 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	TRIML1	Q8N9V2	468 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	TAF4B	Q92750	862 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	MYADM	Q96S97	322 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	CORO1B	Q9BR76	489 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	SNX25	Q9H3E2	840 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	ASAH2	Q9NR71	780 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	GDE1	Q9NZC3	331 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	CDH9	Q9ULB4	789 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	SLC27A5	Q9Y2P5	690 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	PCDHB5	Q9Y5E4	795 aa		13.26	□□□□□ -0.29
RBM23-223	ENST00000556838	N4BP1	O75113	896 aa	Known RBP	13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	FGF19	O95750	216 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	GNL1	P36915	607 aa	Predicted RBP	13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	MCCD1	P59942	119 aa	Predicted RBP	13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	MORC3	Q14149	939 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	MGAT5B	Q3V5L5	792 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	ZNF667	Q5HYK9	610 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	ISM2	Q6H9L7	571 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	FOXR2	Q6PJQ5	311 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	C4orf50	Q6ZRC1	276 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	MTSS1L	Q765P7	747 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	ALYREF	Q86V81	257 aa	Known RBP	13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	LRRTM3	Q86VH5	581 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	CCDC150	Q8NCX0	1101 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	ITFG1	Q8TB96	612 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	FGF13	Q92913	245 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	SEPT5	Q99719	369 aa	Predicted RBP	13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	IMPG2	Q9BZV3	1241 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	XYLT2	Q9H1B5	865 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	KCNK12	Q9HB15	430 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	ABCB6	Q9NP58	842 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	ABI2	Q9NYB9	513 aa	Predicted RBP	13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	KIAA1468	Q9P260	1216 aa		13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	NXF1	Q9UBU9	619 aa	Known RBP	13.25	□□□□□ -0.29
RBM23-223	ENST00000556838	BICDL2	A1A5D9	508 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	ASGR2	P07307	311 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	TRIM49	P0CI25	452 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	TRIM49C	P0CI26	452 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	HAPLN1	P10915	354 aa	Predicted RBP	13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	ACAT1	P24752	427 aa	Known RBP	13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	PIK3CA	P42336	1068 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	EPHA5	P54756	1037 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	SIGLEC14	Q08ET2	396 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	TDG	Q13569	410 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	TAF12	Q16514	161 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	OSTM1	Q86WC4	334 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	OR6B3	Q8NGW1	331 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	FAM200A	Q8TCP9	573 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	KBTBD7	Q8WVZ9	684 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	PSMG2	Q969U7	264 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	CEP63	Q96MT8	703 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	SYT15	Q9BQS2	421 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	CRISPLD1	Q9H336	500 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	METTL14	Q9HCE5	456 aa	Known RBP	13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	TMEM8A	Q9HCN3	771 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	CEP72	Q9P209	647 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	GTF3C4	Q9UKN8	822 aa		13.24	□□□□□ -0.29
RBM23-223	ENST00000556838	TMEM221	A6NGB7	291 aa		13.23	□□□□□ -0.29
RBM23-223	ENST00000556838	PPP1R3G	B7ZBB8	358 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms