RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	HLA-DRA	P01903	254 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	CYP11A1	P05108	521 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	PDGFRB	P09619	1106 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	EPB41	P11171	864 aa	Known RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	ODC1	P11926	461 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	KRT13	P13646	458 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	TYMP	P19971	482 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	MRPS5	P82675	430 aa	Known RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	ORC1	Q13415	861 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	TRPC3	Q13507	836 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	PUS10	Q3MIT2	529 aa	Known RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	CCDC183	Q5T5S1	534 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	TCERG1L	Q5VWI1	586 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	PTCRA	Q6ISU1	281 aa	Predicted RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	LIMS2	Q7Z4I7	341 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	USP37	Q86T82	979 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	TTC9B	Q8N6N2	239 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	ATAD1	Q8NBU5	361 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	ST13P5	Q8NFI4	369 aa	Predicted RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	ATXN2L	Q8WWM7	1075 aa	Known RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	SLC35C1	Q96A29	364 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	ZNF707	Q96C28	371 aa	Predicted RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	MMS19	Q96T76	1030 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	GTPBP4	Q9BZE4	634 aa	Known RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	SMYD3	Q9H7B4	428 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	SAMSN1	Q9NSI8	373 aa	Known RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	GDAP2	Q9NXN4	497 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	STK39	Q9UEW8	545 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	ARMCX3	Q9UH62	379 aa	Predicted RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	CD207	Q9UJ71	328 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	USP15	Q9Y4E8	981 aa	Predicted RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	KIAA1671	Q9BY89	1806 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	VCAN	P13611	3396 aa		9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	PRRC2B	Q5JSZ5	2229 aa	Known RBP	9.46	□□□□□ -0.9
PRKCH-222	ENST00000556778	PLXNA4	Q9HCM2	1894 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	BICDL2	A1A5D9	508 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	MYBPHL	A2RUH7	354 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778		H7C4K7	107 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	GABRD	O14764	452 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	SLC16A3	O15427	465 aa	Known RBP	9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	CCL16	O15467	120 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	MBTPS2	O43462	519 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	HUS1	O60921	280 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	SP100	P23497	879 aa	Predicted RBP	9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	PNPLA4	P41247	253 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	PSMC1	P62191	440 aa	Known RBP	9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	NTHL1	P78549	312 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	APBA1	Q02410	837 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	ADCY1	Q08828	1119 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	LRMP	Q12912	555 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	MYO1E	Q12965	1108 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	DUSP4	Q13115	394 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	ZNF699	Q32M78	642 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	CCDC40	Q4G0X9	1142 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	SLC39A12	Q504Y0	691 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	ZNF280D	Q6N043	979 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	SCARA5	Q6ZMJ2	495 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	FRMD5	Q7Z6J6	570 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	PPFIBP1	Q86W92	1011 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	METTL23	Q86XA0	190 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	GPR65	Q8IYL9	337 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	ADGRF2	Q8IZF7	708 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	SMRP1	Q8NCR6	262 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	ZNF461	Q8TAF7	563 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	SLC7A14	Q8TBB6	771 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	GPR152	Q8TDT2	470 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	CASP10	Q92851	521 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	ZNF560	Q96MR9	790 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	CEP63	Q96MT8	703 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	MKNK1	Q9BUB5	465 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	RHOBTB2	Q9BYZ6	727 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	ZCWPW1	Q9H0M4	648 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	DNAJC25	Q9H1X3	360 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	ADAM7	Q9H2U9	754 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	DPEP3	Q9H4B8	488 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	CYP4F11	Q9HBI6	524 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	TMEM8A	Q9HCN3	771 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	CD320	Q9NPF0	282 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	HCFC1R1	Q9NWW0	138 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	DDX43	Q9NXZ2	648 aa	Known RBP	9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	FBXW11	Q9UKB1	542 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	GTF3C4	Q9UKN8	822 aa		9.45	□□□□□ -0.9
PRKCH-222	ENST00000556778	TRIM66	O15016	1216 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	CLSTN1	O94985	981 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	ASS1	P00966	412 aa	Known RBP	9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	C8A	P07357	584 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	CPB1	P15086	417 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	GNL1	P36915	607 aa	Predicted RBP	9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	PPP1R2	P41236	205 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	PIK3CA	P42336	1068 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	ASPA	P45381	313 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	GPR15	P49685	360 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	AP3M2	P53677	418 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	TYRO3	Q06418	890 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	GPR17	Q13304	367 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	SGSM1	Q2NKQ1	1148 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	KRT39	Q6A163	491 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	PDXDC1	Q6P996	788 aa		9.44	□□□□□ -0.9
PRKCH-222	ENST00000556778	SASS6	Q6UVJ0	657 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms