RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ARID3AQ99856 593 aa12.02□□□□□ -0.49
FOXN3-212ENST00000556541 MRPL45Q9BRJ2 306 aaKnown RBP12.02□□□□□ -0.49
FOXN3-212ENST00000556541 NKX2-4Q9H2Z4 354 aa12.02□□□□□ -0.49
FOXN3-212ENST00000556541 LMCD1Q9NZU5 365 aa12.02□□□□□ -0.49
FOXN3-212ENST00000556541 BZW2Q9Y6E2 419 aaKnown RBP12.02□□□□□ -0.49
FOXN3-212ENST00000556541 RANBP2P49792 3224 aaKnown RBP12.02□□□□□ -0.49
FOXN3-212ENST00000556541 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-212ENST00000556541 FOXN3O00409 490 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-212ENST00000556541 MFAP3LO75121 409 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 WEE2P0C1S8 567 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 PBX3P40426 434 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 RAD23BP54727 409 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 INTS6LQ5JSJ4 861 aaKnown RBP12.01□□□□□ -0.49
FOXN3-212ENST00000556541 RTP2Q5QGT7 225 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 ARHGAP17Q68EM7 881 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 FAM171BQ6P995 826 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 GJB7Q6PEY0 223 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 RTL10Q7L3V2 364 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 OSTM1Q86WC4 334 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 VPS52Q8N1B4 723 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 LNX1Q8TBB1 728 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-212ENST00000556541 HASPINQ8TF76 798 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 C2orf15Q8WU43 125 aaKnown RBP12.01□□□□□ -0.49
FOXN3-212ENST00000556541 KAT5Q92993 513 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 TMEM176AQ96HP8 235 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 FUBP3Q96I24 572 aaKnown RBP eCLIP12.01□□□□□ -0.49
FOXN3-212ENST00000556541 PKMYT1Q99640 499 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 RTP3Q9BQQ7 232 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 C17orf80Q9BSJ5 609 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 SNX25Q9H3E2 840 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 MRPL17Q9NRX2 175 aaKnown RBP12.01□□□□□ -0.49
FOXN3-212ENST00000556541 DDX43Q9NXZ2 648 aaKnown RBP12.01□□□□□ -0.49
FOXN3-212ENST00000556541 AJAP1Q9UKB5 411 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-212ENST00000556541 PATJQ8NI35 1801 aa12.01□□□□□ -0.49
FOXN3-212ENST00000556541 AKR1B15C9JRZ8 316 aaPredicted RBP12□□□□□ -0.49
FOXN3-212ENST00000556541 I3L4J1 428 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 GFPT2O94808 682 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 VDRP11473 427 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 POU3F3P20264 500 aaPredicted RBP12□□□□□ -0.49
FOXN3-212ENST00000556541 CASP14P31944 242 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 KRT9P35527 623 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 NDST1P52848 882 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 CDH8P55286 799 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 TSPY1Q01534 308 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 APBA1Q02410 837 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 PTK2Q05397 1052 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 GPM6BQ13491 265 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 RAPGEF1Q13905 1077 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 SMC1AQ14683 1233 aaKnown RBP12□□□□□ -0.49
FOXN3-212ENST00000556541 PTPN14Q15678 1187 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 PSMD5Q16401 504 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 NFE2Q16621 373 aaPredicted RBP12□□□□□ -0.49
FOXN3-212ENST00000556541 TPGS2Q68CL5 300 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 TMEM270Q6UE05 265 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 SCARA5Q6ZMJ2 495 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 DCP1BQ8IZD4 617 aaKnown RBP12□□□□□ -0.49
FOXN3-212ENST00000556541 SLC4A11Q8NBS3 891 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
FOXN3-212ENST00000556541 OR8K1Q8NGG5 319 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 OR6B3Q8NGW1 331 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 MYCBPAPQ8TBZ2 947 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 RABGGTAQ92696 567 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 CEP295NLQ96MC4 621 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 PANX2Q96RD6 677 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 ZCWPW1Q9H0M4 648 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 ABCB6Q9NP58 842 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 NLRC4Q9NPP4 1024 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 TLR9Q9NR96 1032 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 PCDHGC3Q9UN70 934 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 NME7Q9Y5B8 376 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 PCDHB4Q9Y5E5 795 aa12□□□□□ -0.49
FOXN3-212ENST00000556541 LRRC53A6NM62 1247 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 A8MXQ7 604 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 CLCN1P35523 988 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 RAP1GAPP47736 663 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 NDUFV1P49821 464 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 GPR17Q13304 367 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 RAB33AQ14088 237 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 CNGA2Q16280 664 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 ARHGAP44Q17R89 818 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 CFAP221Q4G0U5 840 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 CTXN3Q4LDR2 81 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 SFMBT2Q5VUG0 894 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 KIAA1841Q6NSI8 718 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 TAS1R1Q7RTX1 841 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 IRF2BP2Q7Z5L9 587 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 MRPL43Q8N983 215 aaKnown RBP11.99□□□□□ -0.49
FOXN3-212ENST00000556541 TC2NQ8N9U0 490 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 B3GALNT2Q8NCR0 500 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 HDAC7Q8WUI4 952 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 POF1BQ8WVV4 589 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 RIN2Q8WYP3 895 aaPredicted RBP11.99□□□□□ -0.49
FOXN3-212ENST00000556541 PPP1R9BQ96SB3 815 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 SYT15Q9BQS2 421 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 SYT11Q9BT88 431 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 ELOVL4Q9GZR5 314 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 ABHD10Q9NUJ1 306 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 CUL9Q8IWT3 2517 aa11.99□□□□□ -0.49
FOXN3-212ENST00000556541 ATP8B3O60423 1300 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 SSU72P8A0A1W2PR75 194 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms