RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 KCNB1Q14721 858 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 SURF1Q15526 300 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 TEAD2Q15562 447 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 MGAT5BQ3V5L5 792 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 FAM78AQ5JUQ0 283 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 STXBP5Q5T5C0 1151 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 SDHAF4Q5VUM1 108 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 TDRD10Q5VZ19 366 aaKnown RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 CWF19L1Q69YN2 538 aaKnown RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 TANGO2Q6ICL3 276 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 PDZD4Q76G19 769 aaPredicted RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 DNAJB7Q7Z6W7 309 aaPredicted RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 GPIHBP1Q8IV16 184 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 SLC9A9Q8IVB4 645 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 ADGRF2Q8IZF7 708 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 THEM5Q8N1Q8 247 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 TOP6BLQ8N6T0 577 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 TMEM105Q8N8V8 129 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 PRSS33Q8NF86 280 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 GOLGA5Q8TBA6 731 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 PARD3BQ8TEW8 1205 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 GIPC2Q8TF65 315 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 RSPRY1Q96DX4 576 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 ZNF512Q96ME7 567 aaPredicted RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 FNBP1Q96RU3 617 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 SEPT5Q99719 369 aaPredicted RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 MRPL45Q9BRJ2 306 aaKnown RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 PI4K2AQ9BTU6 479 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 XYLT2Q9H1B5 865 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 ABI2Q9NYB9 513 aaPredicted RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 CGNQ9P2M7 1197 aaKnown RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 GTF3C4Q9UKN8 822 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 CA14Q9ULX7 337 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 HCN4Q9Y3Q4 1203 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 ZFP37Q9Y6Q3 630 aaPredicted RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 COL4A3Q01955 1670 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 PIEZO1Q92508 2521 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 A0A1W2PRU2 124 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 PI15O43692 258 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 AKAP3O75969 853 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 VNN1O95497 513 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 C4BPAP04003 597 aaKnown RBP8.7□□□□□ -1.02
VTI1B-206ENST00000556461 SRFP11831 508 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 CYP2F1P24903 491 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 AVPR2P30518 371 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 ALDH1A3P47895 512 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 EPHB3P54753 998 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 PSMC1P62191 440 aaKnown RBP8.7□□□□□ -1.02
VTI1B-206ENST00000556461 CLDN10P78369 228 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 FAM160A1Q05DH4 1040 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 MYO1EQ12965 1108 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 ZCWPW2Q504Y3 356 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 INTS6LQ5JSJ4 861 aaKnown RBP8.7□□□□□ -1.02
VTI1B-206ENST00000556461 CYP4A22Q5TCH4 519 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 CEP135Q66GS9 1140 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 IQCEQ6IPM2 695 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 GAREM2Q75VX8 874 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 SUGP1Q8IWZ8 645 aaKnown RBP8.7□□□□□ -1.02
VTI1B-206ENST00000556461 SIX5Q8N196 739 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 TMEM86AQ8N2M4 240 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 ELMOD1Q8N336 334 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 GUF1Q8N442 669 aaKnown RBP8.7□□□□□ -1.02
VTI1B-206ENST00000556461 TMEM174Q8WUU8 243 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 PSMG2Q969U7 264 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 NXPE3Q969Y0 559 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 ACBD6Q9BR61 282 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 MKNK1Q9BUB5 465 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 IL21Q9HBE4 155 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 CRTAC1Q9NQ79 661 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 ASAH2Q9NR71 780 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 GDE1Q9NZC3 331 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 FBXL21Q9UKT6 434 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 TRAF3IP3Q9Y228 551 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 WDR87Q6ZQQ6 2873 aa8.7□□□□□ -1.02
VTI1B-206ENST00000556461 VPS13AQ96RL7 3174 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 GOLGA6L4A6NEF3 574 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 ZNF197O14709 1029 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 LRRN2O75325 713 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 PRPF40AO75400 957 aaKnown RBP8.69□□□□□ -1.02
VTI1B-206ENST00000556461 MICAL2O94851 1124 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 PDGFRBP09619 1106 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 TRIM49P0CI25 452 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 TRIM49CP0CI26 452 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 HMGA1P17096 107 aaKnown RBP8.69□□□□□ -1.02
VTI1B-206ENST00000556461 WARSP23381 471 aaKnown RBP8.69□□□□□ -1.02
VTI1B-206ENST00000556461 GABRR2P28476 465 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 VIPR2P41587 438 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 RAP1GAPP47736 663 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 TUFMP49411 452 aaKnown RBP8.69□□□□□ -1.02
VTI1B-206ENST00000556461 CDH8P55286 799 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 MYL7Q01449 175 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 TSPY1Q01534 308 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 PLD1Q13393 1074 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 BIRC3Q13489 604 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 GRM2Q14416 872 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 NFIL3Q16649 462 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 DDR2Q16832 855 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 FAM171BQ6P995 826 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 MTSS1LQ765P7 747 aa8.69□□□□□ -1.02
VTI1B-206ENST00000556461 TMEM150AQ86TG1 271 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms