RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 FCHO2Q0JRZ9 810 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 SRSF5Q13243 272 aaKnown RBP14.35□□□□□ -0.11
TGFB3-204ENST00000556285 MGAT5BQ3V5L5 792 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 RRAGBQ5VZM2 374 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 FAM200AQ8TCP9 573 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 SAAL1Q96ER3 474 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 FAM213AQ9BRX8 229 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 MRPL44Q9H9J2 332 aaKnown RBP14.35□□□□□ -0.11
TGFB3-204ENST00000556285 GTSE1Q9NYZ3 720 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 STK17AQ9UEE5 414 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 ASB3Q9Y575 518 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 ANAPC1Q9H1A4 1944 aa14.35□□□□□ -0.11
TGFB3-204ENST00000556285 GOLGA8IPA6NC78 632 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 GOLGA8JA6NMD2 632 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 KPNA7A9QM74 516 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 SYT1P21579 422 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 GPR15P49685 360 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 TNK2Q07912 1038 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 CCDC142Q17RM4 750 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 Q6ZS52 159 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 TMEM150AQ86TG1 271 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 METTL23Q86XA0 190 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 YAF2Q8IY57 180 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 CSGALNACT1Q8TDX6 532 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 E2F7Q96AV8 911 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 HVCN1Q96D96 273 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 CNTNAP3BQ96NU0 1288 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 SLC46A2Q9BY10 475 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 CNTNAP3Q9BZ76 1288 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 ABI2Q9NYB9 513 aaPredicted RBP14.34□□□□□ -0.11
TGFB3-204ENST00000556285 CCDC39Q9UFE4 941 aa14.34□□□□□ -0.11
TGFB3-204ENST00000556285 SPAG17Q6Q759 2223 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 KMT2BQ9UMN6 2715 aaPredicted RBP14.33□□□□□ -0.12
TGFB3-204ENST00000556285 DCDC2BA2VCK2 349 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 SPECC1L-ADORA2AF8WAN1 911 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 HCRTO43612 131 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 HAPLN1P10915 354 aaPredicted RBP14.33□□□□□ -0.12
TGFB3-204ENST00000556285 IDEP14735 1019 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 PAX3P23760 479 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 ABCD1P33897 745 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 TUFMP49411 452 aaKnown RBP14.33□□□□□ -0.12
TGFB3-204ENST00000556285 KPNA1P52294 538 aaPredicted RBP14.33□□□□□ -0.12
TGFB3-204ENST00000556285 TFAMQ00059 246 aaKnown RBP14.33□□□□□ -0.12
TGFB3-204ENST00000556285 L1TD1Q5T7N2 865 aaKnown RBP14.33□□□□□ -0.12
TGFB3-204ENST00000556285 SDHAF4Q5VUM1 108 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 SV2BQ7L1I2 683 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 ITIH5Q86UX2 942 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 THEM5Q8N1Q8 247 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 GLIS3Q8NEA6 775 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 CXorf38Q8TB03 319 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 ACCSQ96QU6 501 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 USP28Q96RU2 1077 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 TASP1Q9H6P5 420 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 HSFX1Q9UBD0 423 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 DSEQ9UL01 958 aa14.33□□□□□ -0.12
TGFB3-204ENST00000556285 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.33□□□□□ -0.12
TGFB3-204ENST00000556285 MYBPHLA2RUH7 354 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 DPYSL4O14531 572 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 PRPF6O94906 941 aaKnown RBP14.32□□□□□ -0.12
TGFB3-204ENST00000556285 IL18RAPO95256 599 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 GCNT3O95395 438 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 ITGB3P05106 788 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 HMGA1P17096 107 aaKnown RBP14.32□□□□□ -0.12
TGFB3-204ENST00000556285 GAP43P17677 238 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 POLR2BP30876 1174 aaKnown RBP14.32□□□□□ -0.12
TGFB3-204ENST00000556285 CTHP32929 405 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 POU5F1Q01860 360 aaKnown RBP14.32□□□□□ -0.12
TGFB3-204ENST00000556285 SPEM2Q0P670 501 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 VEPH1Q14D04 833 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 POSTNQ15063 836 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 SV2CQ496J9 727 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 ARHGAP15Q53QZ3 475 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 PKN3Q6P5Z2 889 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 MAMSTRQ6ZN01 415 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 BRSK2Q8IWQ3 736 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 PDCL2Q8N4E4 241 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 C1orf127Q8N9H9 656 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 HPS3Q969F9 1004 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 CBWD1Q9BRT8 395 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 PI4K2AQ9BTU6 479 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 PCIF1Q9H4Z3 704 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 SEL1LQ9UBV2 794 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 AGAP1Q9UPQ3 857 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 MTMR6Q9Y217 621 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 CCL26Q9Y258 94 aa14.32□□□□□ -0.12
TGFB3-204ENST00000556285 HELZP42694 1942 aaKnown RBP14.31□□□□□ -0.12
TGFB3-204ENST00000556285 FRMD3A2A2Y4 597 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 CHURC1-FNTBB4DL54 471 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 K7ESF4 209 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 HRO43593 1189 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 KRT37O76014 449 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 FGF19O95750 216 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 PDCP20941 246 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 ACAT1P24752 427 aaKnown RBP14.31□□□□□ -0.12
TGFB3-204ENST00000556285 CXCL12P48061 93 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 FNTBP49356 437 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 MLLT6P55198 1093 aaPredicted RBP14.31□□□□□ -0.12
TGFB3-204ENST00000556285 PON2Q15165 354 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 ARHGAP29Q52LW3 1261 aa14.31□□□□□ -0.12
TGFB3-204ENST00000556285 OSTM1Q86WC4 334 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms