RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 GMEB2Q9UKD1 530 aa11.95□□□□□ -0.5
CHGA-205ENST00000556098 NDRG2Q9UN36 371 aaKnown RBP11.95□□□□□ -0.5
CHGA-205ENST00000556098 SIK3Q9Y2K2 1263 aa11.95□□□□□ -0.5
CHGA-205ENST00000556098 ZNF638Q14966 1978 aaKnown RBP11.95□□□□□ -0.5
CHGA-205ENST00000556098 DNAH14Q0VDD8 3507 aa11.95□□□□□ -0.5
CHGA-205ENST00000556098 CITO14578 2027 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 ANHXE9PGG2 379 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 ZBTB39O15060 712 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 SPTLC1O15269 473 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 PMM2O15305 246 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 ZMYND10O75800 440 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 NPTXRO95502 500 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 C8AP07357 584 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 CCDC175P0C221 793 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 KRT13P13646 458 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 PEX3P56589 373 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 STARD6P59095 220 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 NCBP1Q09161 790 aaKnown RBP11.94□□□□□ -0.5
CHGA-205ENST00000556098 SPEM2Q0P670 501 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 CETN1Q12798 172 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 MXD4Q14582 209 aaPredicted RBP11.94□□□□□ -0.5
CHGA-205ENST00000556098 MEA1Q16626 185 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 TMEM132AQ24JP5 1023 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 SLC44A4Q53GD3 710 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 NOTUMQ6P988 496 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 PRR23BQ6ZRT6 265 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 MTSS1LQ765P7 747 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 FAM186BQ8IYM0 893 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 CCDC170Q8IYT3 715 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 HACE1Q8IYU2 909 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 PRIMPOLQ96LW4 560 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 PCMTD1Q96MG8 357 aaPredicted RBP11.94□□□□□ -0.5
CHGA-205ENST00000556098 NXF3Q9H4D5 531 aaKnown RBP11.94□□□□□ -0.5
CHGA-205ENST00000556098 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.94□□□□□ -0.5
CHGA-205ENST00000556098 CEP72Q9P209 647 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 ARHGAP28Q9P2N2 729 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 ADAM28Q9UKQ2 775 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 CDH7Q9ULB5 785 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 RAB23Q9ULC3 237 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 GREB1Q4ZG55 1949 aa11.94□□□□□ -0.5
CHGA-205ENST00000556098 TTC26A0AVF1 554 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 CASTOR2A6NHX0 329 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 TSPAN1O60635 241 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 IPO7O95373 1038 aaKnown RBP11.93□□□□□ -0.5
CHGA-205ENST00000556098 PIGRP01833 764 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 SDHBP21912 280 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 GARTP22102 1010 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 ANXA13P27216 316 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 HOXA11P31270 313 aaPredicted RBP11.93□□□□□ -0.5
CHGA-205ENST00000556098 CYLC1P35663 651 aaPredicted RBP11.93□□□□□ -0.5
CHGA-205ENST00000556098 NPTX2P47972 431 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 EFNA5P52803 228 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 LMNB2Q03252 620 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 DNTTIP2Q5QJE6 756 aaKnown RBP11.93□□□□□ -0.5
CHGA-205ENST00000556098 ZBTB41Q5SVQ8 909 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 SLFN12LQ6IEE8 588 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 XXYLT1Q8NBI6 393 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 TMEM161BQ8NDZ6 487 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 ITFG1Q8TB96 612 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 FGF13Q92913 245 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 C2orf40Q9H1Z8 148 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 TMEM134Q9H6X4 195 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 LTB4R2Q9NPC1 389 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 HCFC1R1Q9NWW0 138 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 FBXO4Q9UKT5 387 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 TBX20Q9UMR3 447 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 OTOGLQ3ZCN5 2332 aa11.93□□□□□ -0.5
CHGA-205ENST00000556098 ANK1P16157 1881 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 SFI1A8K8P3 1242 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 ASAP2O43150 1006 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 EXOC3O60645 756 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 XYLBO75191 536 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 AKAP3O75969 853 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 ARL2P36404 184 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 ADKP55263 362 aaKnown RBP11.92□□□□□ -0.5
CHGA-205ENST00000556098 CREMQ03060 361 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 PRKCQQ04759 706 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 POU5F1BQ06416 359 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 STRN3Q13033 797 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 PSMD5Q16401 504 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 RTP2Q5QGT7 225 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 FAM171A1Q5VUB5 890 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 CEP135Q66GS9 1140 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 E4F1Q66K89 784 aaPredicted RBP11.92□□□□□ -0.5
CHGA-205ENST00000556098 GBP6Q6ZN66 633 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 ZNF662Q6ZS27 426 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 SLC7A14Q8TBB6 771 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 HDAC7Q8WUI4 952 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 MCRS1Q96EZ8 462 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 BORCS6Q96GS4 357 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 PAAF1Q9BRP4 392 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 POLR3FQ9H1D9 316 aaPredicted RBP11.92□□□□□ -0.5
CHGA-205ENST00000556098 LUC7LQ9NQ29 371 aaKnown RBP11.92□□□□□ -0.5
CHGA-205ENST00000556098 XPNPEP1Q9NQW7 623 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 ZSCAN32Q9NX65 697 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 PAXBP1Q9Y5B6 917 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 PCDHGA2Q9Y5H1 932 aa11.92□□□□□ -0.5
CHGA-205ENST00000556098 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.92□□□□□ -0.5
CHGA-205ENST00000556098 COL4A2P08572 1712 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms