RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 XPOTO43592 962 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 OPA1O60313 960 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 SYF2O95926 243 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 CYBAP13498 195 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 ECHS1P30084 290 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 GBP1P32455 592 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 COILP38432 576 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 SSR1P43307 286 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 STILQ15468 1287 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 SGO2Q562F6 1265 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 PPP1R15BQ5SWA1 713 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 DDX42Q86XP3 938 aaKnown RBP eCLIP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 JAMLQ86YT9 394 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 CCDC50Q8IVM0 306 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 CCDC105Q8IYK2 499 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 KATNAL2Q8IYT4 538 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 ZDHHC14Q8IZN3 488 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 TMEM130Q8N3G9 435 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 LRRC52Q8N7C0 313 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 GOLGA6L1Q8N7Z2 621 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 C12orf50Q8NA57 414 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 TMEM40Q8WWA1 233 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 ZMAT2Q96NC0 199 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 MCEEQ96PE7 176 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 TWNKQ96RR1 684 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 NT5C1AQ9BXI3 368 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 LRRC19Q9H756 370 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 HOMER3Q9NSC5 361 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 UBQLN1Q9UMX0 589 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 HES2Q9Y543 173 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 MGAMO43451 1857 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 TMEM88BA6NKF7 163 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 SIGLEC16A6NMB1 481 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 AGPSO00116 658 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 RECQL4O94761 1208 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 MICAL2O94851 1124 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 CD4P01730 458 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 KRT3P12035 628 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 HSPA9P38646 679 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 NDST1P52848 882 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 GSCP56915 257 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 ORC1Q13415 861 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 ZNF268Q14587 947 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 SIX1Q15475 284 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 PTPN20Q4JDL3 420 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 CFAP58Q5T655 872 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 LRRC38Q5VT99 294 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 DUPD1Q68J44 220 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 RSPH3Q86UC2 560 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 RCOR2Q8IZ40 523 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 TSEN2Q8NCE0 465 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 TRPV1Q8NER1 839 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 EXD1Q8NHP7 514 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 MIS12Q9H081 205 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 NXF3Q9H4D5 531 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 VPS18Q9P253 973 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 HMGXB4Q9UGU5 601 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 FEZ2Q9UHY8 353 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 SNX9Q9Y5X1 595 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 PCNTO95613 3336 aa10.68□□□□□ -0.7
EFCAB11-209ENST00000556005 TCRBV7S2A1N4TA0A589 114 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 M0QYV0 167 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 O00370 1275 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 GJB6O95452 261 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 RARBP10826 455 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 AKAP5P24588 427 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 PTGIRP43119 386 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 GPD2P43304 727 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 FLT3LGP49771 235 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 TAS2R40P59535 323 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 PSMC1P62191 440 aaKnown RBP10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 ODF2Q5BJF6 829 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 CYP4A22Q5TCH4 519 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 NIPA2Q8N8Q9 360 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 FNIP1Q8TF40 1166 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 TRIB2Q92519 343 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 ZIC5Q96T25 663 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 TRIM51Q9BSJ1 452 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 APOL6Q9BWW8 343 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 TRIM31Q9BZY9 425 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 DPH5Q9H2P9 285 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 PARP2Q9UGN5 583 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 GTF2IRD1Q9UHL9 959 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 FAN1Q9Y2M0 1017 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 CITO14578 2027 aa10.67□□□□□ -0.7
EFCAB11-209ENST00000556005 SMIM28A0A1B0GU29 152 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 MYADML2A6NDP7 307 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 F8VP50 259 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 SEPT4O43236 478 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 RNF40O75150 1001 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 ECEL1O95672 775 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 RPLP2P05387 115 aaKnown RBP10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 KCNE1P15382 129 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 PNPLA4P41247 253 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 GABRB2P47870 512 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 GLRA4Q5JXX5 417 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 ZFYVE27Q5T4F4 411 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 DAB2IPQ5VWQ8 1189 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms