RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CENPPQ6IPU0 288 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 PTCRAQ6ISU1 281 aaPredicted RBP4.21□□□□□ -1.74
LINC00648-202ENST00000555985 FOXR1Q6PIV2 292 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 PRSS55Q6UWB4 352 aaPredicted RBP4.21□□□□□ -1.74
LINC00648-202ENST00000555985 RBM43Q6ZSC3 357 aaKnown RBP4.21□□□□□ -1.74
LINC00648-202ENST00000555985 TMC7Q7Z402 723 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 CBWD2Q8IUF1 395 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 CEP57L1Q8IYX8 460 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 FAM193BQ96PV7 902 aaPredicted RBP4.21□□□□□ -1.74
LINC00648-202ENST00000555985 LRRC3Q9BY71 257 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 OXCT2Q9BYC2 517 aaPredicted RBP4.21□□□□□ -1.74
LINC00648-202ENST00000555985 XYLT2Q9H1B5 865 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 RPF1Q9H9Y2 349 aaKnown RBP4.21□□□□□ -1.74
LINC00648-202ENST00000555985 KIAA1586Q9HCI6 787 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 SLC39A2Q9NP94 309 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 C11orf16Q9NQ32 467 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 ZDHHC7Q9NXF8 308 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 DOCK8Q8NF50 2099 aa4.21□□□□□ -1.74
LINC00648-202ENST00000555985 WDR27A2RRH5 827 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 EFCAB8A8MWE9 144 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 H3BQ06 376 aaPredicted RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 TADA3O75528 432 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 VNN1O95497 513 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 C4BPAP04003 597 aaKnown RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 URODP06132 367 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 FAM163BP0C2L3 166 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 AFMP43652 599 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ZNF165P49910 485 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 EPHA5P54756 1037 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PNOCQ13519 176 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 MORC3Q14149 939 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 TMEM132DQ14C87 1099 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PRSS36Q5K4E3 855 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 VARS2Q5ST30 1063 aaKnown RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 FAM171A1Q5VUB5 890 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 KANK3Q6NY19 840 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 RBM23Q86U06 439 aaKnown RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 WDR49Q8IV35 697 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 TCEAL8Q8IYN2 117 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ZDHHC14Q8IZN3 488 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 LRRC52Q8N7C0 313 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 OR5B17Q8NGF7 314 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 KBTBD7Q8WVZ9 684 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 POMGNT1Q8WZA1 660 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 SAAL1Q96ER3 474 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 CCDC34Q96HJ3 373 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 GSDMAQ96QA5 445 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 MED15Q96RN5 788 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 FAM213AQ9BRX8 229 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 SRRTQ9BXP5 876 aaKnown RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 EMILIN2Q9BXX0 1053 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 FUT8Q9BYC5 575 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ZCWPW1Q9H0M4 648 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 CRISPLD1Q9H336 500 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PLEKHA4Q9H4M7 779 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 SFXN1Q9H9B4 322 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 INTS13Q9NVM9 706 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 DPP3Q9NY33 737 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 CDH22Q9UJ99 828 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ITGA11Q9UKX5 1188 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ANAPC1Q9H1A4 1944 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 A0A087WUV0 522 aaPredicted RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PPP1R3GB7ZBB8 358 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 H3BQF6 201 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 I3L4J1 428 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 TNFRSF10AO00220 468 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 TADA2AO75478 443 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 MICAL2O94851 1124 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 CLSTN1O94985 981 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 SEC24AO95486 1093 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 CAVIN2O95810 425 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ADH1AP07327 375 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 HNRNPA1P09651 372 aaKnown RBP eCLIP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 IDEP14735 1019 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PMS1P54277 932 aaKnown RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 SPAG1Q07617 926 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PSMD5Q16401 504 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 SNRNP35Q16560 246 aaKnown RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 CAMK4Q16566 473 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 EDRF1Q3B7T1 1238 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ZNF658Q5TYW1 1059 aaPredicted RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 E4F1Q66K89 784 aaPredicted RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ANKS3Q6ZW76 656 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 TADA2BQ86TJ2 420 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ADSSL1Q8N142 457 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 OR10T2Q8NGX3 314 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 RASSF8Q8NHQ8 419 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PARD3BQ8TEW8 1205 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 HASPINQ8TF76 798 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 RIN2Q8WYP3 895 aaPredicted RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PPP2R3CQ969Q6 453 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 BICD1Q96G01 975 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 FAM84AQ96KN4 292 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PPP1R13BQ96KQ4 1090 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 NECAB3Q96P71 396 aaPredicted RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 CGRRF1Q99675 332 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PHF7Q9BWX1 381 aaPredicted RBP4.2□□□□□ -1.74
LINC00648-202ENST00000555985 POMKQ9H5K3 350 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 PDE11AQ9HCR9 933 aa4.2□□□□□ -1.74
LINC00648-202ENST00000555985 ARFGAP3Q9NP61 516 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms