RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 SHMT1P34896 483 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 MED21Q13503 144 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 HIF1AQ16665 826 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 TMEM259Q4ZIN3 620 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 CFAP157Q5JU67 520 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 MAP3K21Q5TCX8 1036 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 KRT39Q6A163 491 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 PDSS2Q86YH6 399 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 OR6Y1Q8NGX8 325 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 LENG1Q96BZ8 264 aaPredicted RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 MTBPQ96DY7 904 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 PRR11Q96HE9 360 aaPredicted RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 PLEKHG4BQ96PX9 1271 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 PANX3Q96QZ0 392 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 PAFAH2Q99487 392 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 LBHD1Q9BQE6 289 aaPredicted RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 CDCA7Q9BWT1 371 aaPredicted RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 FHDC1Q9C0D6 1143 aaPredicted RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 NMUR2Q9GZQ4 415 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 C1orf21Q9H246 121 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 PCDH9Q9HC56 1237 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 PREBQ9HCU5 417 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 SLC17A7Q9P2U7 560 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 TAGLN3Q9UI15 199 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 H3BRJ5 948 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 LPXNO60711 386 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 OPHN1O60890 802 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 UQCRBP14927 111 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 ETV4P43268 484 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 CLCN2P51788 898 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 GPX6P59796 221 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 NFX1Q12986 1120 aaKnown RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 GRAPQ13588 217 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 LIN9Q5TKA1 542 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 C1orf146Q5VVC0 180 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 CIAPIN1Q6FI81 312 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 CAPN12Q6ZSI9 719 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 TTC7BQ86TV6 843 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 RASSF3Q86WH2 238 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 RCOR2Q8IZ40 523 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 MARCH10Q8NA82 808 aaPredicted RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 RBM15BQ8NDT2 890 aaKnown RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 GRAPLQ8TC17 118 aaPredicted RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 PLEKHO2Q8TD55 490 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 PYROXD1Q8WU10 500 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 FAM172AQ8WUF8 416 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 IRGQQ8WZA9 623 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 PPP1R14BQ96C90 147 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 APOPT1Q96IL0 206 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 FAM118BQ9BPY3 351 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 CBWD1Q9BRT8 395 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 WWP1Q9H0M0 922 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 SUDS3Q9H7L9 328 aaPredicted RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 TMEM8AQ9HCN3 771 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 MRPL47Q9HD33 250 aaKnown RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 DNPEPQ9ULA0 475 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 STRIP2Q9ULQ0 834 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 BCS1LQ9Y276 419 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.17□□□□□ -1.1
CHD8-209ENST00000555935 SBF2Q86WG5 1849 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 CLUHO75153 1309 aa8.17□□□□□ -1.1
CHD8-209ENST00000555935 IQANK1A0A1B0GTG1 560 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 AP1G1O43747 822 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 BAG2O95816 211 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 MT-ND3P03897 115 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ITGA2BP08514 1039 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 DESP17661 470 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 GLRA2P23416 452 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 NSFP46459 744 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 TAS2R40P59535 323 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 IRX4P78413 519 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 SFSWAPQ12872 951 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 USP4Q13107 963 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 MFSD14BQ5SR56 506 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ACBD5Q5T8D3 534 aaPredicted RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 PPP1R2P3Q6NXS1 205 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 DHDDSQ86SQ9 333 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 DAW1Q8N136 415 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 DCAKDQ8WVC6 231 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 SEMA4DQ92854 862 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 NKD2Q969F2 451 aaPredicted RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 MKL1Q969V6 931 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 DGCR14Q96DF8 476 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 MRRFQ96E11 262 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 C7orf26Q96N11 449 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 TTC1Q99614 292 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 WDR11Q9BZH6 1224 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 EBF3Q9H4W6 596 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 SLC7A8Q9UHI5 535 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 DAGLAQ9Y4D2 1042 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ZHX2Q9Y6X8 837 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 DENND3A2RUS2 1198 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 GAS7O60861 476 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ENO1P06733 434 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 ITGAVP06756 1048 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 EEF2P13639 858 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 GTF2H1P32780 548 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 PTPN7P35236 360 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms