RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 MGAT5BQ3V5L5 792 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 ARID3BQ8IVW6 561 aaPredicted RBP13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 GPD1LQ8N335 351 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 ZBTB44Q8NCP5 570 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 ACBD6Q9BR61 282 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 CBWD1Q9BRT8 395 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 FGFBP2Q9BYJ0 223 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 TRIM9Q9C026 710 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 ATXN3LQ9H3M9 355 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 C8orf33Q9H7E9 229 aaPredicted RBP13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 KIAA1586Q9HCI6 787 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 PIAS3Q9Y6X2 628 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 R4GN57 208 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 COL4A3Q01955 1670 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 NCANO14594 1321 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 FAM186AA6NE01 2351 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 CUTAO60888 179 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 HUS1O60921 280 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 ITGB3P05106 788 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 DDX6P26196 483 aaKnown RBP eCLIP13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 POLR2BP30876 1174 aaKnown RBP13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 WNT7BP56706 349 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 SNRPFP62306 86 aaKnown RBP13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 TFAMQ00059 246 aaKnown RBP13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 PLCB2Q00722 1185 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 TSPY1Q01534 308 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 PPP2R5DQ14738 602 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 SURF1Q15526 300 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 ARHGAP29Q52LW3 1261 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 ATL3Q6DD88 541 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 DPH6Q7L8W6 267 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 LRRTM3Q86VH5 581 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 YAF2Q8IY57 180 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 PDCL2Q8N4E4 241 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 TOP6BLQ8N6T0 577 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 PDILTQ8N807 584 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 IQUBQ8NA54 791 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 FAM3CQ92520 227 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 SAAL1Q96ER3 474 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 GCNAQ96QF7 691 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 SEPT5Q99719 369 aaPredicted RBP13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 PANK2Q9BZ23 570 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 TASP1Q9H6P5 420 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 IL21Q9HBE4 155 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 ZSCAN32Q9NX65 697 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 PCDHB5Q9Y5E4 795 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 FANCMQ8IYD8 2048 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 DMXL1Q9Y485 3027 aa13.67□□□□□ -0.22
HNRNPC-221ENST00000555883 UBE4BO95155 1302 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 GABRDO14764 452 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 LILRB5O75023 590 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 SOAT2O75908 522 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 LHX1P48742 406 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 RBP5P82980 135 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 MYL7Q01449 175 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 CFAP221Q4G0U5 840 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 STXBP5Q5T5C0 1151 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 GPR158Q5T848 1215 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 EPM2AIP1Q7L775 607 aaPredicted RBP13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 RALGPS2Q86X27 583 aaPredicted RBP13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 ZSWIM2Q8NEG5 633 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 KCNG4Q8TDN1 519 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 CSGALNACT1Q8TDX6 532 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 RUBCNQ92622 972 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 RSPRY1Q96DX4 576 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 FUBP3Q96I24 572 aaKnown RBP eCLIP13.66□□□□□ -0.229e-8■■□□□ 14.1
HNRNPC-221ENST00000555883 LPIN3Q9BQK8 851 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 L1RE1Q9UN81 338 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 AGAP1Q9UPQ3 857 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 SCN1AP35498 2009 aa13.66□□□□□ -0.22
HNRNPC-221ENST00000555883 PTPRZ1P23471 2315 aaPredicted RBP13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 MYBPHLA2RUH7 354 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 ZNF233A6NK53 670 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 DPYSL4O14531 572 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 PRPF6O94906 941 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 PAPSS2O95340 614 aaPredicted RBP13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 TMEM191BP0C7N4 346 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 CSH1P0DML2 217 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 CSH2P0DML3 217 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 CHRNB1P11230 501 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 HMGA1P17096 107 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 PCSK1P29120 753 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 CCR3P51677 355 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 NRLP54845 237 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 CSTF1Q05048 431 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 EHHADHQ08426 723 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 MYO1EQ12965 1108 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 MTAPQ13126 283 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 TAF12Q16514 161 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 INTS6LQ5JSJ4 861 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 SHC4Q6S5L8 630 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 CSGALNACT2Q8N6G5 542 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 CELF5Q8N6W0 485 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 ZNF507Q8TCN5 953 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 BPIFB1Q8TDL5 484 aa13.65□□□□□ -0.22
HNRNPC-221ENST00000555883 ATRIPQ8WXE1 791 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms