RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 GRM6O15303 877 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 LPXNO60711 386 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 GYPCP04921 128 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 PDGFRBP09619 1106 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 KRT5P13647 590 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 LMO2P25791 158 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 CASP14P31944 242 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 SOX5P35711 763 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 USP8P40818 1118 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 TSPY1Q01534 308 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 PTK2Q05397 1052 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 SMARCB1Q12824 385 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 MAPRE1Q15691 268 aaKnown RBP13.29□□□□□ -0.28
SHMT2-221ENST00000555773 TSR1Q2NL82 804 aaKnown RBP13.29□□□□□ -0.28
SHMT2-221ENST00000555773 SLC8B1Q6J4K2 584 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 OSTM1Q86WC4 334 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 CNGA4Q8IV77 575 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 DCP1BQ8IZD4 617 aaKnown RBP13.29□□□□□ -0.28
SHMT2-221ENST00000555773 MRPL43Q8N983 215 aaKnown RBP13.29□□□□□ -0.28
SHMT2-221ENST00000555773 OR8K1Q8NGG5 319 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 MICAL1Q8TDZ2 1067 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 B3GALT6Q96L58 329 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 RTP3Q9BQQ7 232 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 GPR88Q9GZN0 384 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 ZNF576Q9H609 170 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 AIPL1Q9NZN9 384 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 MTRRQ9UBK8 725 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 AJAP1Q9UKB5 411 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-221ENST00000555773 PDCD11Q14690 1871 aaKnown RBP13.29□□□□□ -0.28
SHMT2-221ENST00000555773 PTPRSQ13332 1948 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 SCN1AP35498 2009 aa13.29□□□□□ -0.28
SHMT2-221ENST00000555773 AKR1B15C9JRZ8 316 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-221ENST00000555773 RNF225M0QZC1 329 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-221ENST00000555773 FSCN2O14926 492 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 C1RP00736 705 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 VDRP11473 427 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 FERP16591 822 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 PTPN1P18031 435 aaKnown RBP13.28□□□□□ -0.28
SHMT2-221ENST00000555773 KRT9P35527 623 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 FXR1P51114 621 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHMT2-221ENST00000555773 ZNF132P52740 706 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 RAD23BP54727 409 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 ERVFC1P60507 584 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 SMC1AQ14683 1233 aaKnown RBP13.28□□□□□ -0.28
SHMT2-221ENST00000555773 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 PSMD5Q16401 504 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 PTPROQ16827 1216 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 SFMBT2Q5VUG0 894 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 FAM171BQ6P995 826 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 SPRED2Q7Z698 418 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 SLC4A11Q8NBS3 891 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 RBBP8NLQ8NC74 664 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-221ENST00000555773 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
SHMT2-221ENST00000555773 TCF25Q9BQ70 676 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 SYT15Q9BQS2 421 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 EMILIN2Q9BXX0 1053 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 ELOVL4Q9GZR5 314 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 ZCWPW1Q9H0M4 648 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 CERS4Q9HA82 394 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 TRIOBPQ9H2D6 2365 aa13.28□□□□□ -0.28
SHMT2-221ENST00000555773 LRRC53A6NM62 1247 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 C2CD2LO14523 706 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 CYP26A1O43174 497 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 DNAJB1P25685 340 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 HNRNPH3P31942 346 aaKnown RBP13.27□□□□□ -0.29
SHMT2-221ENST00000555773 CLCN1P35523 988 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 GPR17Q13304 367 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 CAMK1Q14012 370 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 STILQ15468 1287 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 PTPN14Q15678 1187 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 NFE2Q16621 373 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-221ENST00000555773 ZNF394Q53GI3 561 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 INTS6LQ5JSJ4 861 aaKnown RBP13.27□□□□□ -0.29
SHMT2-221ENST00000555773 PRSS55Q6UWB4 352 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-221ENST00000555773 IRF2BP2Q7Z5L9 587 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 ACOT1Q86TX2 421 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 B3GALNT2Q8NCR0 500 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 MYCBPAPQ8TBZ2 947 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 TWNKQ96RR1 684 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 DNAJC7Q99615 494 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 CLSTN3Q9BQT9 956 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 ENTPD7Q9NQZ7 604 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 ZNHIT6Q9NWK9 470 aaKnown RBP13.27□□□□□ -0.29
SHMT2-221ENST00000555773 LMCD1Q9NZU5 365 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 MAFFQ9ULX9 164 aa13.27□□□□□ -0.29
SHMT2-221ENST00000555773 BZW2Q9Y6E2 419 aaKnown RBP13.27□□□□□ -0.29
SHMT2-221ENST00000555773 LAMA3Q16787 3333 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 C2orf71A6NGG8 1288 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 MED7O43513 233 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 MFAP3LO75121 409 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 GFPT2O94808 682 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 LAMA2P24043 3122 aaKnown RBP13.26□□□□□ -0.29
SHMT2-221ENST00000555773 ACAT1P24752 427 aaKnown RBP13.26□□□□□ -0.29
SHMT2-221ENST00000555773 OR1D2P34982 312 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 NDUFV1P49821 464 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 GSDMDP57764 484 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 RAB33AQ14088 237 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 CNGA2Q16280 664 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 SGO2Q562F6 1265 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 TPGS2Q68CL5 300 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms