RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 SLFN14P0C7P3 912 aa26.29■■□□□ 1.8
PRKCH-216ENST00000555542 DLATP10515 647 aaKnown RBP26.29■■□□□ 1.8
PRKCH-216ENST00000555542 MYL7Q01449 175 aa26.29■■□□□ 1.8
PRKCH-216ENST00000555542 SNRNP35Q16560 246 aaKnown RBP26.29■■□□□ 1.8
PRKCH-216ENST00000555542 DUOXA2Q1HG44 320 aa26.29■■□□□ 1.8
PRKCH-216ENST00000555542 LRRTM3Q86VH5 581 aa26.29■■□□□ 1.8
PRKCH-216ENST00000555542 TMEM86AQ8N2M4 240 aa26.29■■□□□ 1.8
PRKCH-216ENST00000555542 LEO1Q8WVC0 666 aaPredicted RBP26.29■■□□□ 1.8
PRKCH-216ENST00000555542 GCNAQ96QF7 691 aa26.29■■□□□ 1.8
PRKCH-216ENST00000555542 FNBP1Q96RU3 617 aa26.29■■□□□ 1.8
PRKCH-216ENST00000555542 SIX4Q9UIU6 781 aa26.29■■□□□ 1.8
PRKCH-216ENST00000555542 PCDHB5Q9Y5E4 795 aa26.29■■□□□ 1.8
PRKCH-216ENST00000555542 MIA3Q5JRA6 1907 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 A0A1B0GVL5 298 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 TGFB1I1O43294 461 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 PFKFB1P16118 471 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 TNNI1P19237 187 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 GABRR2P28476 465 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 VIPR2P41587 438 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 SNRPFP62306 86 aaKnown RBP26.28■■□□□ 1.8
PRKCH-216ENST00000555542 EHHADHQ08426 723 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 ARHGAP15Q53QZ3 475 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 TPRG1Q6ZUI0 275 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 WDR49Q8IV35 697 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 ADGRF2Q8IZF7 708 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 OR5B17Q8NGF7 314 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 GIPC2Q8TF65 315 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 LRRC3Q9BY71 257 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 ZNF334Q9HCZ1 680 aaPredicted RBP26.28■■□□□ 1.8
PRKCH-216ENST00000555542 EXOC1Q9NV70 894 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 ATP6V1DQ9Y5K8 247 aa26.28■■□□□ 1.8
PRKCH-216ENST00000555542 PSMC3P17980 439 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 ATF6P18850 670 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 ACAT1P24752 427 aaKnown RBP26.27■■□□□ 1.8
PRKCH-216ENST00000555542 GDI1P31150 447 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 NFE2Q16621 373 aaPredicted RBP26.27■■□□□ 1.8
PRKCH-216ENST00000555542 VITQ6UXI7 678 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 YAF2Q8IY57 180 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 TOP6BLQ8N6T0 577 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 XXYLT1Q8NBI6 393 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 DEPDC1BQ8WUY9 529 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 DNASE1L2Q92874 299 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 CCDC127Q96BQ5 260 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 HPDLQ96IR7 371 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 HEBP1Q9NRV9 189 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 GDAP2Q9NXN4 497 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 PTPRJQ12913 1337 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 COL4A3Q01955 1670 aa26.27■■□□□ 1.8
PRKCH-216ENST00000555542 ACTN4O43707 911 aaKnown RBP26.26■■□□□ 1.79
PRKCH-216ENST00000555542 PRPF40AO75400 957 aaKnown RBP26.26■■□□□ 1.79
PRKCH-216ENST00000555542 HAPLN1P10915 354 aaPredicted RBP26.26■■□□□ 1.79
PRKCH-216ENST00000555542 CD72P21854 359 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 CMA1P23946 247 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 STXBP5Q5T5C0 1151 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 SCARA3Q6AZY7 606 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 CXorf38Q8TB03 319 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 IRF7Q92985 503 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 E2F7Q96AV8 911 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 PAGE5Q96GU1 130 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 CHAMP1Q96JM3 812 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 ACBD6Q9BR61 282 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 PI4K2AQ9BTU6 479 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 CGNQ9P2M7 1197 aaKnown RBP26.26■■□□□ 1.79
PRKCH-216ENST00000555542 USP25Q9UHP3 1055 aa26.26■■□□□ 1.79
PRKCH-216ENST00000555542 DPYSL4O14531 572 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 GFRA3O60609 400 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 CDC25CP30307 473 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 LHX1P48742 406 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 KNOP1Q1ED39 458 aaKnown RBP26.25■■□□□ 1.79
PRKCH-216ENST00000555542 BMT2Q1RMZ1 405 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 INTS6LQ5JSJ4 861 aaKnown RBP26.25■■□□□ 1.79
PRKCH-216ENST00000555542 GPR158Q5T848 1215 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 GAREM2Q75VX8 874 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 BCO2Q9BYV7 579 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 TRPV4Q9HBA0 871 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 TMLHEQ9NVH6 421 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 ZDHHC9Q9Y397 364 aa26.25■■□□□ 1.79
PRKCH-216ENST00000555542 FAM170BA6NMN3 283 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 HEPACAM2A8MVW5 462 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 ZNF263O14978 683 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 EXOC3O60645 756 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 LRRN2O75325 713 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 PCSK1P29120 753 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 CYP24A1Q07973 514 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 ZNF852Q6ZMS4 543 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 GPIHBP1Q8IV16 184 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 SPATA18Q8TC71 538 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 CGRRF1Q99675 332 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 DDX23Q9BUQ8 820 aaKnown RBP26.24■■□□□ 1.79
PRKCH-216ENST00000555542 LTB4R2Q9NPC1 389 aa26.24■■□□□ 1.79
PRKCH-216ENST00000555542 MRPS17Q9Y2R5 130 aaKnown RBP26.24■■□□□ 1.79
PRKCH-216ENST00000555542 CLSTN1O94985 981 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 SYKP43405 635 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 CYP4F8P98187 520 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 PSMD6Q15008 389 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 SOWAHAQ2M3V2 549 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 KMT5BQ4FZB7 885 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 TRAPPC11Q7Z392 1133 aa26.23■■□□□ 1.79
PRKCH-216ENST00000555542 SPATA2LQ8IUW3 424 aaPredicted RBP26.23■■□□□ 1.79
PRKCH-216ENST00000555542 ARID3BQ8IVW6 561 aaPredicted RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms