RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 FRMD1Q8N878 549 aa9.1□□□□□ -0.95
NEK9-206ENST00000555537 OR10T2Q8NGX3 314 aa9.1□□□□□ -0.95
NEK9-206ENST00000555537 WASF1Q92558 559 aa9.1□□□□□ -0.95
NEK9-206ENST00000555537 SENP8Q96LD8 212 aa9.1□□□□□ -0.95
NEK9-206ENST00000555537 RUSC1Q9BVN2 902 aa9.1□□□□□ -0.95
NEK9-206ENST00000555537 FSCN3Q9NQT6 498 aa9.1□□□□□ -0.95
NEK9-206ENST00000555537 DDX19AQ9NUU7 478 aaKnown RBP9.1□□□□□ -0.95
NEK9-206ENST00000555537 ARHGAP28Q9P2N2 729 aa9.1□□□□□ -0.95
NEK9-206ENST00000555537 EBF1Q9UH73 591 aa9.1□□□□□ -0.95
NEK9-206ENST00000555537 NUP210Q8TEM1 1887 aaPredicted RBP9.1□□□□□ -0.95
NEK9-206ENST00000555537 FAM208BQ5VWN6 2430 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 TTC26A0AVF1 554 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 JAK2O60674 1132 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 FGF19O95750 216 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 F11P03951 625 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 OR52Z1P0C646 297 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 CDC25CP30307 473 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 AVPR1AP37288 418 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 MATR3P43243 847 aaKnown RBP eCLIP9.09□□□□□ -0.95
NEK9-206ENST00000555537 GPR15P49685 360 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 SEC13P55735 322 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 LILRA4P59901 499 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 FAM193AP78312 1265 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 RAD51AP2Q09MP3 1159 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 BFSP1Q12934 665 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 MAPK7Q13164 816 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 MYBPC2Q14324 1141 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 NOLC1Q14978 699 aaKnown RBP eCLIP9.09□□□□□ -0.95
NEK9-206ENST00000555537 KARSQ15046 597 aaKnown RBP9.09□□□□□ -0.95
NEK9-206ENST00000555537 USP39Q53GS9 565 aaKnown RBP9.09□□□□□ -0.95
NEK9-206ENST00000555537 SOWAHCQ53LP3 525 aaPredicted RBP9.09□□□□□ -0.95
NEK9-206ENST00000555537 C2orf27AQ580R0 203 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 SDHAF4Q5VUM1 108 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 ANO7Q6IWH7 933 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 CC2D1AQ6P1N0 951 aaPredicted RBP9.09□□□□□ -0.95
NEK9-206ENST00000555537 ARMCX6Q7L4S7 300 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 CYP2U1Q7Z449 544 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 ABCA7Q8IZY2 2146 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 CHCHD4Q8N4Q1 142 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 CCDC33Q8N5R6 958 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 RLN3Q8WXF3 142 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 CD101Q93033 1021 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 FAM212AQ96EL1 285 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 GCNAQ96QF7 691 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 CYP2S1Q96SQ9 504 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 OXCT2Q9BYC2 517 aaPredicted RBP9.09□□□□□ -0.95
NEK9-206ENST00000555537 TMEM74BQ9NUR3 256 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 TDP1Q9NUW8 608 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 CIZ1Q9ULV3 898 aaPredicted RBP9.09□□□□□ -0.95
NEK9-206ENST00000555537 TBX20Q9UMR3 447 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 MAGED2Q9UNF1 606 aaPredicted RBP9.09□□□□□ -0.95
NEK9-206ENST00000555537 MSRB2Q9Y3D2 182 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 NEUROG3Q9Y4Z2 214 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 CITO14578 2027 aa9.09□□□□□ -0.95
NEK9-206ENST00000555537 AKAP13Q12802 2813 aa9.09□□□□□ -0.96
NEK9-206ENST00000555537 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 PP2D1A8MPX8 630 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 CLDN3O15551 220 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 TOM1L1O75674 476 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 HNRNPLP14866 589 aaKnown RBP eCLIP9.08□□□□□ -0.96
NEK9-206ENST00000555537 HMGA1P17096 107 aaKnown RBP9.08□□□□□ -0.96
NEK9-206ENST00000555537 TYMPP19971 482 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 CDC25AP30304 524 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 TUFMP49411 452 aaKnown RBP9.08□□□□□ -0.96
NEK9-206ENST00000555537 NLRP12P59046 1061 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 SIM1P81133 766 aaPredicted RBP9.08□□□□□ -0.96
NEK9-206ENST00000555537 AMPD2Q01433 879 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 STRN3Q13033 797 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 NBR1Q14596 966 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 VEPH1Q14D04 833 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 ME3Q16798 604 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 FBXO43Q4G163 708 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 TRIM61Q5EBN2 209 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 RINT1Q6NUQ1 792 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 C1orf186Q6ZWK4 172 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 CENPQQ7L2Z9 268 aaPredicted RBP9.08□□□□□ -0.96
NEK9-206ENST00000555537 KCNK18Q7Z418 384 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 TMEFF1Q8IYR6 380 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 DEFB119Q8N690 84 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 TSTD1Q8NFU3 115 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 COL26A1Q96A83 441 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 SLC22A12Q96S37 553 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 ZCWPW1Q9H0M4 648 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 LINC00597Q9H2U6 94 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 ECT2Q9H8V3 914 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 DUS2Q9NX74 493 aaKnown RBP9.08□□□□□ -0.96
NEK9-206ENST00000555537 DAXXQ9UER7 740 aaPredicted RBP9.08□□□□□ -0.96
NEK9-206ENST00000555537 LRWD1Q9UFC0 647 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 MBD1Q9UIS9 605 aaPredicted RBP9.08□□□□□ -0.96
NEK9-206ENST00000555537 UBQLN1Q9UMX0 589 aaKnown RBP9.08□□□□□ -0.96
NEK9-206ENST00000555537 RBM19Q9Y4C8 960 aaKnown RBP9.08□□□□□ -0.96
NEK9-206ENST00000555537 WNT6Q9Y6F9 365 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 NUP205Q92621 2012 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 THADAQ6YHU6 1953 aa9.08□□□□□ -0.96
NEK9-206ENST00000555537 ATXN2Q99700 1313 aaKnown RBP9.07□□□□□ -0.96
NEK9-206ENST00000555537 K7EQS6 105 aa9.07□□□□□ -0.96
NEK9-206ENST00000555537 CAPNS1P04632 268 aa9.07□□□□□ -0.96
NEK9-206ENST00000555537 HAPLN1P10915 354 aaPredicted RBP9.07□□□□□ -0.96
NEK9-206ENST00000555537 ODC1P11926 461 aa9.07□□□□□ -0.96
NEK9-206ENST00000555537 ENGP17813 658 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms