RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 PIGWQ7Z7B1 504 aa12.49□□□□□ -0.41
XRCC3-208ENST00000554811 SULF1Q8IWU6 871 aa12.49□□□□□ -0.41
XRCC3-208ENST00000554811 BBOF1Q8ND07 529 aa12.49□□□□□ -0.41
XRCC3-208ENST00000554811 HEXIM2Q96MH2 286 aaKnown RBP12.49□□□□□ -0.41
XRCC3-208ENST00000554811 FAM111AQ96PZ2 611 aa12.49□□□□□ -0.41
XRCC3-208ENST00000554811 SLC38A10Q9HBR0 1119 aa12.49□□□□□ -0.41
XRCC3-208ENST00000554811 KLRG2A4D1S0 409 aaPredicted RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 VWA5AO00534 786 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 ENTPD5O75356 428 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 DNAJC8O75937 253 aaPredicted RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 ATP2A2P16615 1042 aaKnown RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 NCKAP1LP55160 1127 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 NOMO3P69849 1222 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 NBPF20Q3BBV1 942 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 ZNF568Q3ZCX4 644 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 FAM102AQ5T9C2 384 aaPredicted RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 FBXO36Q8NEA4 188 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 RBM41Q96IZ5 413 aaKnown RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 CISHQ9NSE2 258 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 ANKEF1Q9NU02 776 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 MYPNQ86TC9 1320 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 RFC1P35251 1148 aaPredicted RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 SLC1A1P43005 524 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 PTGER2P43116 358 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 BMPR2Q13873 1038 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 ANKRD22Q5VYY1 191 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 SPOCD1Q6ZMY3 1216 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 PDIK1LQ8N165 341 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 DDX1Q92499 740 aaKnown RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 FAM81BQ96LP2 452 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 MIS12Q9H081 205 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 XPO7Q9UIA9 1087 aaKnown RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 G3BP2Q9UN86 482 aaKnown RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 M0QYV0 167 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 TAC1P20366 129 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 CDH6P55285 790 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 EIF3EP60228 445 aaKnown RBP12.48□□□□□ -0.41
XRCC3-208ENST00000554811 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 LRRC6Q86X45 466 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 CENPTQ96BT3 561 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 FAF2Q96CS3 445 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 ATXN7L3BQ96GX2 97 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 TXLNGQ9NUQ3 528 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 ZNRF3Q9ULT6 936 aa12.48□□□□□ -0.41
XRCC3-208ENST00000554811 SBF2Q86WG5 1849 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 CFAP73A6NFT4 308 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 DKC1O60832 514 aaKnown RBP eCLIP12.47□□□□□ -0.41
XRCC3-208ENST00000554811 PGK2P07205 417 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 RBP3P10745 1247 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 GDF10P55107 478 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 CCNG2Q16589 344 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 HADHQ16836 314 aaKnown RBP12.47□□□□□ -0.41
XRCC3-208ENST00000554811 SESTD1Q86VW0 696 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 C3orf20Q8ND61 904 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 TTC8Q8TAM2 541 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 AGR3Q8TD06 166 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 P3H4Q92791 437 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 STMN2Q93045 179 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 SEPT10Q9P0V9 454 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 MCF2LO15068 1137 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 TNNC2P02585 160 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 KDSRQ06136 332 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 XKR3Q5GH77 459 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 JOSD2Q8TAC2 188 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 SPATA18Q8TC71 538 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 MAGEB18Q96M61 343 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 RAB3IPQ96QF0 476 aaPredicted RBP12.47□□□□□ -0.41
XRCC3-208ENST00000554811 A1CFQ9NQ94 594 aaKnown RBP12.47□□□□□ -0.41
XRCC3-208ENST00000554811 HACL1Q9UJ83 578 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 PDE4DIPQ5VU43 2346 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 LPXNO60711 386 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 APRTP07741 180 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 GHRP10912 638 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 UNGP13051 313 aaPredicted RBP12.47□□□□□ -0.41
XRCC3-208ENST00000554811 GLRA2P23416 452 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 RXRBP28702 533 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 PHBP35232 272 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 ARL4CP56559 192 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 GCNT1Q02742 428 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 LMNB2Q03252 620 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 TNFAIP1Q13829 316 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 AMHR2Q16671 573 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 LRRC36Q1X8D7 754 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 ZACNQ401N2 412 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 STYK1Q6J9G0 422 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
XRCC3-208ENST00000554811 FLAD1Q8NFF5 587 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 TCP10LQ8TDR4 215 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 RXFP1Q9HBX9 757 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 FBXO6Q9NRD1 293 aaPredicted RBP12.47□□□□□ -0.41
XRCC3-208ENST00000554811 RAB6BQ9NRW1 208 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 SLC17A7Q9P2U7 560 aa12.47□□□□□ -0.41
XRCC3-208ENST00000554811 MRPL42Q9Y6G3 142 aaKnown RBP12.47□□□□□ -0.41
XRCC3-208ENST00000554811 CCDC78A2IDD5 438 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms