RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 FNBP1Q96RU3 617 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 KXD1Q9BQD3 176 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 LRRC3Q9BY71 257 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 MTMR12Q9C0I1 747 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 DNAJC25Q9H1X3 360 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 TRPV4Q9HBA0 871 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 EXOC1Q9NV70 894 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 L1RE1Q9UN81 338 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 PCDHB5Q9Y5E4 795 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 GREB1Q4ZG55 1949 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 F5P12259 2224 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 CACNA1IQ9P0X4 2223 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 PTPRDP23468 1912 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 OBSL1O75147 1896 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-213ENST00000554508 A0A1W2PQ27 194 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 A0A1W2PQ64 194 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 A0A1W2PQD8 194 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 PDXKO00764 312 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 PI15O43692 258 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 KIF20AO95235 890 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 FAM163BP0C2L3 166 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 HAPLN1P10915 354 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-213ENST00000554508 TNNI1P19237 187 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 PCSK1P29120 753 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 CYP24A1Q07973 514 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 STK4Q13043 487 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 VEPH1Q14D04 833 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 TEAD2Q15562 447 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 MLF2Q15773 248 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-213ENST00000554508 MGAT5BQ3V5L5 792 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 KMT5BQ4FZB7 885 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 ARHGAP15Q53QZ3 475 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 FAM78AQ5JUQ0 283 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 LMBRD2Q68DH5 695 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-213ENST00000554508 POTEHQ6S545 545 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 TRAPPC11Q7Z392 1133 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 LIMS2Q7Z4I7 341 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 LRRTM3Q86VH5 581 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 CCDC105Q8IYK2 499 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 GRAMD1CQ8IYS0 662 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 DTWD2Q8NBA8 298 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 ST13P5Q8NFI4 369 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-213ENST00000554508 OR5B17Q8NGF7 314 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 SHKBP1Q8TBC3 707 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 FAM200AQ8TCP9 573 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 ATOH1Q92858 354 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-213ENST00000554508 DNASE1L2Q92874 299 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 CCDC34Q96HJ3 373 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 SEPT5Q99719 369 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-213ENST00000554508 PLA2G2FQ9BZM2 168 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 TBC1D17Q9HA65 648 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 GDPD2Q9HCC8 539 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 DDX43Q9NXZ2 648 aaKnown RBP9.37□□□□□ -0.91
ACTN1-213ENST00000554508 SIX4Q9UIU6 781 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 ZMYM5Q9UJ78 669 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 SIT1Q9Y3P8 196 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 SNX9Q9Y5X1 595 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 MYH10P35580 1976 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 TICRRQ7Z2Z1 1910 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 ANAPC1Q9H1A4 1944 aa9.37□□□□□ -0.91
ACTN1-213ENST00000554508 A0A1W2PRU2 124 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 KANSL1LA0AUZ9 987 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 SOBPA7XYQ1 873 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 GABRDO14764 452 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 EXOC3O60645 756 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 STAU1O95793 577 aaKnown RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 RPN1P04843 607 aaKnown RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 DLATP10515 647 aaKnown RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 GJA1P17302 382 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 PSMC3P17980 439 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 FCARP24071 287 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 WEE1P30291 646 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 CDC25CP30307 473 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 NDUFA8P51970 172 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 AP3M2P53677 418 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 SNW1Q13573 536 aaKnown RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 TAF12Q16514 161 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 SOWAHAQ2M3V2 549 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 INTS6LQ5JSJ4 861 aaKnown RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 ALYREFQ86V81 257 aaKnown RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 SLC9A9Q8IVB4 645 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 MFSD6LQ8IWD5 586 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 ADGRF2Q8IZF7 708 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 TTC9BQ8N6N2 239 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 FSIP1Q8NA03 581 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 KIAA0895Q8NCT3 520 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 ZSCAN18Q8TBC5 510 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 DEPDC1BQ8WUY9 529 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 IRF7Q92985 503 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 ZSWIM3Q96MP5 696 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 NELL2Q99435 816 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 CGRRF1Q99675 332 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 DDX23Q9BUQ8 820 aaKnown RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 TRMT61BQ9BVS5 477 aaKnown RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 OSBPL6Q9BZF3 934 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 ATXN3LQ9H3M9 355 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 SLITRK6Q9H5Y7 841 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms