RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 FAM107BQ9H098 131 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 AURKAIP1Q9NWT8 199 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 SAGE1Q9NXZ1 904 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 TBC1D7Q9P0N9 293 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 NDOR1Q9UHB4 597 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 ITGB1BP2Q9UKP3 347 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 WDR37Q9Y2I8 494 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 RRP15Q9Y3B9 282 aaKnown RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 LRRFIP2Q9Y608 721 aaKnown RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 COL4A5P29400 1685 aa4.9□□□□□ -1.62
ATXN3-227ENST00000554491 MKI67P46013 3256 aaKnown RBP4.9□□□□□ -1.62
ATXN3-227ENST00000554491 PMS2P1A4D2B8 440 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 H0YIN7 160 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 PDLIM1O00151 329 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 TRAF5O00463 557 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 CHL1O00533 1208 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 OPA1O60313 960 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 KRT4P19013 534 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 CYP11B2P19099 503 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 MAKP20794 623 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 ENPP1P22413 925 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 TM4SF1P30408 202 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 CRKLP46109 303 aaKnown RBP4.9□□□□□ -1.63
ATXN3-227ENST00000554491 ATP2C1P98194 919 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-227ENST00000554491 SLC25A3Q00325 362 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 NOGQ13253 232 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 CRHR2Q13324 411 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 EIF4A2Q14240 407 aaKnown RBP4.9□□□□□ -1.63
ATXN3-227ENST00000554491 KCTD2Q14681 263 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 TMEM132BQ14DG7 1078 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 WTAPQ15007 396 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 CNGA3Q16281 694 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 SLC4A8Q2Y0W8 1093 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 CST9Q5W186 159 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 FAAH2Q6GMR7 532 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 PACS1Q6VY07 963 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 Q6ZPA2 131 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 PEX5LQ8IYB4 626 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 SAMD14Q8IZD0 417 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-227ENST00000554491 GPT2Q8TD30 523 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 PIBF1Q8WXW3 757 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 DLG3Q92796 817 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 VMP1Q96GC9 406 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 RPS6KC1Q96S38 1066 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 MPHOSPH6Q99547 160 aaKnown RBP4.9□□□□□ -1.63
ATXN3-227ENST00000554491 MAP3K14Q99558 947 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 SH3GL1Q99961 368 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 THUMPD2Q9BTF0 503 aaKnown RBP4.9□□□□□ -1.63
ATXN3-227ENST00000554491 UTP14AQ9BVJ6 771 aaKnown RBP4.9□□□□□ -1.63
ATXN3-227ENST00000554491 CCDC113Q9H0I3 377 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 TSPY26PQ9H489 355 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 MKS1Q9NXB0 559 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 DCAF16Q9NXF7 216 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 PSD3Q9NYI0 1048 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 SEL1LQ9UBV2 794 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 PCSK1NQ9UHG2 260 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 MAGEL2Q9UJ55 1249 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 B3GALT1Q9Y5Z6 326 aa4.9□□□□□ -1.63
ATXN3-227ENST00000554491 KIAA0100Q14667 2235 aaKnown RBP4.9□□□□□ -1.63
ATXN3-227ENST00000554491 ST20-MTHFSA0A0A6YYL1 179 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 A0A1W2PRX2 142 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 GOLGA6L10A6NI86 522 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 RTN2O75298 545 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 RTN3O95197 1032 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 MYCLP1P12525 358 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 TRIM21P19474 475 aaKnown RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 RAB27AP51159 221 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 SCNN1GP51170 649 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 MRPL12P52815 198 aaKnown RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 TPM4P67936 248 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 MECOMQ03112 1051 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 CCDC152Q4G0S7 254 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 COBLL1Q53SF7 1204 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 GBP6Q6ZN66 633 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 Q6ZRM9 215 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 MICALCLQ6ZW33 695 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 OVCH1Q7RTY7 1134 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 ARMC9Q7Z3E5 817 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 MRGPRGQ86SM5 289 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 ERC1Q8IUD2 1116 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 ARL10Q8N8L6 244 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 SLC7A14Q8TBB6 771 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 RTF1Q92541 710 aaKnown RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 EXOC4Q96A65 974 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 CENPTQ96BT3 561 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 ZBTB10Q96DT7 871 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 MRFAP1L1Q96HT8 127 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 SCLYQ96I15 445 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 CDHR1Q96JP9 859 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 RNPC3Q96LT9 517 aaKnown RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 NEUROD6Q96NK8 337 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 SLC39A3Q9BRY0 314 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 CELF4Q9BZC1 486 aaKnown RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 LRRCC1Q9C099 1032 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 SLKQ9H2G2 1235 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 ZNHIT6Q9NWK9 470 aaKnown RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 PARPBPQ9NWS1 579 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 TRMT1Q9NXH9 659 aaKnown RBP4.89□□□□□ -1.63
ATXN3-227ENST00000554491 DKK3Q9UBP4 350 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms