RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZNF627Q7L945 461 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 FUBP1Q96AE4 644 aaKnown RBP6.28□□□□□ -1.4
SCFD1-211ENST00000554437 SUCLG2Q96I99 432 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 TTYH3Q9C0H2 523 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 LRRC27Q9C0I9 530 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 CASS4Q9NQ75 786 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 INTS13Q9NVM9 706 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 HESX1Q9UBX0 185 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 TMX2Q9Y320 296 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 F5H697 171 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 MYO1FO00160 1098 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 TBX3O15119 743 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 FRS3O43559 492 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 PRC1O43663 620 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 SOAT2O75908 522 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 BRAFP15056 766 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 ITGALP20701 1170 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 GATA3P23771 443 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 ACVRL1P37023 503 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 NPTX2P47972 431 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 SLC11A2P49281 568 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 TOB1P50616 345 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-211ENST00000554437 SUMO3P55854 103 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-211ENST00000554437 UCP3P55916 312 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 SLC13A2Q13183 592 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 SEMA5AQ13591 1074 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 BOP1Q14137 746 aaKnown RBP6.27□□□□□ -1.41
SCFD1-211ENST00000554437 HLTFQ14527 1009 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCFD1-211ENST00000554437 HLXQ14774 488 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-211ENST00000554437 LONRF3Q496Y0 759 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 TMPRSS9Q7Z410 1059 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 ULK2Q8IYT8 1036 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 DNAJC5GQ8N7S2 189 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 Q96MF0 132 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 SLC46A1Q96NT5 459 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 HEPHQ9BQS7 1158 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 POLR3GLQ9BT43 218 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 KIAA1586Q9HCI6 787 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 DDX21Q9NR30 783 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCFD1-211ENST00000554437 XPR1Q9UBH6 696 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 CPNE7Q9UBL6 633 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 FAM50BQ9Y247 325 aa6.27□□□□□ -1.41
SCFD1-211ENST00000554437 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-211ENST00000554437 ISM1B1AKI9 464 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 MAP4K4O95819 1239 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-211ENST00000554437 MYF5P13349 255 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 GCLCP48506 637 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-211ENST00000554437 NDUFV1P49821 464 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 CTBP1Q13363 440 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 COBLL1Q53SF7 1204 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 LAYNQ6UX15 382 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 KSR2Q6VAB6 950 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 FAM9AQ8IZU1 332 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-211ENST00000554437 MPP5Q8N3R9 675 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 SLC15A4Q8N697 577 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 SLC16A11Q8NCK7 471 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 SSH3Q8TE77 659 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 APIPQ96GX9 242 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 MOGAT1Q96PD6 335 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 SPATA5L1Q9BVQ7 753 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 SCAND2PQ9GZW5 306 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-211ENST00000554437 TMPRSS5Q9H3S3 457 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 SACM1LQ9NTJ5 587 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 OGDHLQ9ULD0 1010 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 DMTF1Q9Y222 760 aa6.26□□□□□ -1.41
SCFD1-211ENST00000554437 SPATA31A3Q5VYP0 1347 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 A0A0B4J269 797 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 TMEM191CA6NGB0 347 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 TRIAP1O43715 76 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 CAND2O75155 1236 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 KRT18P05783 430 aaKnown RBP6.25□□□□□ -1.41
SCFD1-211ENST00000554437 HKR1P10072 659 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 ZKSCAN1P17029 563 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-211ENST00000554437 AVPR1BP47901 424 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 BLOC1S1P78537 153 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 TAP1Q03518 808 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 KLF10Q13118 480 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 TUBB3Q13509 450 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 RAB32Q13637 225 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 FHL2Q14192 279 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 IQCB1Q15051 598 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 SF3B3Q15393 1217 aaKnown RBP6.25□□□□□ -1.41
SCFD1-211ENST00000554437 CNGA2Q16280 664 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 SLC44A4Q53GD3 710 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 LAIR1Q6GTX8 287 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 SUPT20HQ8NEM7 779 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 SLC30A5Q8TAD4 765 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 CAVIN3Q969G5 261 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 SARGQ9BW04 601 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 APOL5Q9BWW9 433 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 DPH1Q9BZG8 443 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 ZNF287Q9HBT7 754 aa6.25□□□□□ -1.41
SCFD1-211ENST00000554437 CYR61O00622 381 aa6.24□□□□□ -1.41
SCFD1-211ENST00000554437 DCLK1O15075 740 aa6.24□□□□□ -1.41
SCFD1-211ENST00000554437 PQBP1O60828 265 aaKnown RBP6.24□□□□□ -1.41
SCFD1-211ENST00000554437 ATXN1LP0C7T5 689 aaKnown RBP6.24□□□□□ -1.41
SCFD1-211ENST00000554437 VIPR2P41587 438 aa6.24□□□□□ -1.41
SCFD1-211ENST00000554437 ZNF134P52741 427 aa6.24□□□□□ -1.41
SCFD1-211ENST00000554437 TBX4P57082 545 aa6.24□□□□□ -1.41
SCFD1-211ENST00000554437 FMO1Q01740 532 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms