RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 RBM15Q96T37 977 aaKnown RBP eCLIP17.83■□□□□ 0.451e-6■■□□□ 12.1
PPP4R3A-202ENST00000554390 MXRA8Q9BRK3 442 aa17.83■□□□□ 0.45
PPP4R3A-202ENST00000554390 PLVAPQ9BX97 442 aa17.83■□□□□ 0.45
PPP4R3A-202ENST00000554390 DCLK3Q9C098 648 aa17.83■□□□□ 0.45
PPP4R3A-202ENST00000554390 MRPS9P82933 396 aaKnown RBP17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 THOC5Q13769 683 aaKnown RBP17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 MAPK6Q16659 721 aa17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 RINLQ6ZS11 566 aa17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 NSL1Q96IY1 281 aa17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 NR1H4Q96RI1 486 aaPredicted RBP17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 TUBGCP5Q96RT8 1024 aa17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 RAB20Q9NX57 234 aa17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 PHF24Q9UPV7 400 aa17.83■□□□□ 0.44
PPP4R3A-202ENST00000554390 A0A1W2PPM1 405 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 PIK3CDO00329 1044 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 CYP1A2P05177 515 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 SLC18A1P54219 525 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 RTP1P59025 263 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 DYNLT1P63172 113 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 EFTUD2Q15029 972 aaKnown RBP eCLIP17.82■□□□□ 0.447e-10■■■■□ 23.1
PPP4R3A-202ENST00000554390 KRT39Q6A163 491 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 TXNRD3NBQ6F5E7 133 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 SLC39A4Q6P5W5 647 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 NT5C1BQ96P26 610 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 TAAR1Q96RJ0 339 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 IDI2Q9BXS1 227 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 ASCC2Q9H1I8 757 aaPredicted RBP17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 ATXN10Q9UBB4 475 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 HEY2Q9UBP5 337 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 TCEAL9Q9UHQ7 104 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 A0A0G2JND7 137 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 DHX15O43143 795 aaKnown RBP17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 ETS2P15036 469 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 DSG3P32926 999 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 MAN1A1P33908 653 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 CETN2P41208 172 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 TMEM130Q8N3G9 435 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 PDCD7Q8N8D1 485 aaKnown RBP17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 NCSTNQ92542 709 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 PRR11Q96HE9 360 aaPredicted RBP17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 HNRNPDLO14979 420 aaKnown RBP17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 TROVE2P10155 538 aaKnown RBP eCLIP17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 NPTX2P47972 431 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 RPL7AP62424 266 aaKnown RBP17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 CC2D2BQ6DHV5 1058 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 ACAD10Q6JQN1 1059 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 CFAP57Q96MR6 1250 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 TAS2R1Q9NYW7 299 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 ANKFY1Q9P2R3 1169 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 UMODL1Q5DID0 1318 aa17.82■□□□□ 0.44
PPP4R3A-202ENST00000554390 ASTN2O75129 1339 aaPredicted RBP17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 ZBTB41Q5SVQ8 909 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 RELL1Q8IUW5 271 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 FBXL13Q8NEE6 735 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 VPS37BQ9H9H4 285 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 DDX43Q9NXZ2 648 aaKnown RBP17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 PLSCR1O15162 318 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 TYROBPO43914 113 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 CCNE2O96020 404 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 P4HBP07237 508 aaKnown RBP17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 ABHD2P08910 425 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 FDX1P10109 184 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 AMPD1P23109 780 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 PIK3CAP42336 1068 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 QARSP47897 775 aaKnown RBP17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 SCNN1BP51168 640 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 MTMR1Q13613 665 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 LIN52Q52LA3 116 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 SLC9A9Q8IVB4 645 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 ZNF398Q8TD17 642 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 ZNF516Q92618 1163 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 TMEM206Q9H813 350 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 DNPEPQ9ULA0 475 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 SLC4A7Q9Y6M7 1214 aa17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 ZNFX1Q9P2E3 1918 aaKnown RBP17.81■□□□□ 0.44
PPP4R3A-202ENST00000554390 GZMAP12544 262 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 TNNI1P19237 187 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 RFX1P22670 979 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 PLCB3Q01970 1234 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 PODNQ7Z5L7 613 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 DDX27Q96GQ7 796 aaKnown RBP17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 PREBQ9HCU5 417 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 FBXO6Q9NRD1 293 aaPredicted RBP17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 LTBP1Q14766 1721 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 PTPRJQ12913 1337 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 C2orf71A6NGG8 1288 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 NFIL3Q16649 462 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 TKFCQ3LXA3 575 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 PCNX4Q63HM2 1172 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 TMEM270Q6UE05 265 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 IZUMO2Q6UXV1 221 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 MCOLN2Q8IZK6 566 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 TUBB6Q9BUF5 446 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 MAK16Q9BXY0 300 aaKnown RBP17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 TBX20Q9UMR3 447 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 FZD1Q9UP38 647 aa17.8■□□□□ 0.44
PPP4R3A-202ENST00000554390 NEU2Q9Y3R4 380 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms