RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 NRP1O14786 923 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 GJB5O95377 273 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 ALDH2P05091 517 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 H2AFZP0C0S5 128 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 TMEM253P0C7T8 217 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 MYBL1P10243 752 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 ACRP10323 421 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 UNGP13051 313 aaPredicted RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 BRD2P25440 801 aaKnown RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 ARHGAP25P42331 645 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 NSFP46459 744 aaKnown RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 OR1G1P47890 313 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 SLC11A1P49279 550 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 ALDH7A1P49419 539 aaKnown RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 GATMP50440 423 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 NOMO3P69849 1222 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 DEFB103AP81534 67 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 TMEM240Q5SV17 173 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 WSCD1Q658N2 575 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 ARHGAP17Q68EM7 881 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 LCLAT1Q6UWP7 414 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 ZNF365Q70YC5 407 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 H2AFVQ71UI9 128 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 OTOP2Q7RTS6 562 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 PALB2Q86YC2 1186 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 TMEM35BQ8NCS4 154 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 MSANTD4Q8NCY6 345 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 PHOSPHO2Q8TCD6 241 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 CTNNBL1Q8WYA6 563 aaPredicted RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 HERVK_113Q902F9 699 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 TFAP2BQ92481 460 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 VCPIP1Q96JH7 1222 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 CALR3Q96L12 384 aaKnown RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 HEXIM2Q96MH2 286 aaKnown RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 SLC9A7Q96T83 725 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 PCDHB18PQ96TA0 734 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 LBHD1Q9BQE6 289 aaPredicted RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 ACBD6Q9BR61 282 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 PDCL3Q9H2J4 239 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 TRMT1Q9NXH9 659 aaKnown RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 CACNG4Q9UBN1 327 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 DNAJB4Q9UDY4 337 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 STK39Q9UEW8 545 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 PUF60Q9UHX1 559 aaKnown RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 GTF3C4Q9UKN8 822 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 CDH9Q9ULB4 789 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.13□□□□□ -1.11
TDP1-209ENST00000554180 FAN1Q9Y2M0 1017 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 PRG3Q9Y2Y8 225 aaPredicted RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 COL4A6Q14031 1691 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 TDRD15B5MCY1 1934 aaKnown RBP8.13□□□□□ -1.11
TDP1-209ENST00000554180 ALPK3Q96L96 1907 aa8.13□□□□□ -1.11
TDP1-209ENST00000554180 NCANO14594 1321 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 RCCD1A6NED2 376 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 ZBBXA8MT70 800 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 KIF5CO60282 957 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 TADA2AO75478 443 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 UPP2O95045 317 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 OAZ2O95190 189 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 ITGB1P05556 798 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 CALB1P05937 261 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 GALTP07902 379 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 SETSIPP0DME0 302 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 LAG3P18627 525 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 PPM1AP35813 382 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 BRCC3P46736 316 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 GALCP54803 685 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 HTRA4P83105 476 aaPredicted RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 YWHAHQ04917 246 aaPredicted RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 C1QBPQ07021 282 aaKnown RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 TCEAL1Q15170 157 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 PTPN14Q15678 1187 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 MAPRE1Q15691 268 aaKnown RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 IFI16Q16666 785 aaKnown RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 PAN2Q504Q3 1202 aaKnown RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 COL13A1Q5TAT6 717 aaPredicted RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 OVOS1Q6IE37 1185 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 ACAD10Q6JQN1 1059 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 NYAP1Q6ZVC0 841 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 MON1BQ7L1V2 547 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 ACOT1Q86TX2 421 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 OSTM1Q86WC4 334 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 PHF13Q86YI8 300 aaPredicted RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 RHOT2Q8IXI1 618 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 THEM5Q8N1Q8 247 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 C17orf53Q8N3J3 647 aaPredicted RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 RNF10Q8N5U6 811 aaKnown RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 B3GALNT2Q8NCR0 500 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 HASPINQ8TF76 798 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 RFFLQ8WZ73 363 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 ZNF558Q96NG5 402 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 NOX5Q96PH1 765 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 YME1L1Q96TA2 773 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 HNRNPABQ99729 332 aaKnown RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 SYT15Q9BQS2 421 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 ZSWIM1Q9BR11 485 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.12□□□□□ -1.112e-6■■□□□ 12.6
TDP1-209ENST00000554180 OXCT2Q9BYC2 517 aaPredicted RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 LACRTQ9GZZ8 138 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms