RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 FOXN2P32314 431 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 KCNJ2P63252 427 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 LMNB2Q03252 620 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 TRPC3Q13507 836 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 EAPPQ56P03 285 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-211ENST00000553882 TREML2Q5T2D2 321 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 CGB2Q6NT52 195 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 ERICH1Q86X53 443 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 WDR49Q8IV35 697 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 C4orf33Q8N1A6 199 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 KIF2BQ8N4N8 673 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 CEP120Q8N960 986 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 ZBTB10Q96DT7 871 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 NIF3L1Q9GZT8 377 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 TMEM134Q9H6X4 195 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 GSTA1P08263 222 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 CD19P15391 556 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 ICAM3P32942 547 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 RAP1GAPP47736 663 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 HIRAP54198 1017 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-211ENST00000553882 GAD2Q05329 585 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 TARBP2Q15633 366 aaKnown RBP15.36■□□□□ 0.05
ACTN1-211ENST00000553882 TFDP3Q5H9I0 405 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 FAM182AQ5T1J6 154 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 ANKMY2Q8IV38 441 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 FITM2Q8N6M3 262 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 UBR7Q8N806 425 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 TRPM4Q8TD43 1214 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 MAML1Q92585 1016 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 CFAP57Q96MR6 1250 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 ECT2Q9H8V3 914 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 NRBP2Q9NSY0 501 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 EURLQ9NYK6 297 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 hCG_1818297A0A087WSY0 165 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 IGKV6D-21A0A0A0MT36 114 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 TCRBV5S1A1TA0A578 114 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 MGRN1O60291 552 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 KRT15P19012 456 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 RFC1P35251 1148 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-211ENST00000553882 WDR4P57081 412 aaKnown RBP15.36■□□□□ 0.05
ACTN1-211ENST00000553882 ZNF699Q32M78 642 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 RELL1Q8IUW5 271 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 DNERQ8NFT8 737 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 MRPL4Q9BYD3 311 aaKnown RBP15.36■□□□□ 0.05
ACTN1-211ENST00000553882 R3HDMLQ9H3Y0 253 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 GGA3Q9NZ52 723 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 AGTPBP1Q9UPW5 1226 aa15.36■□□□□ 0.05
ACTN1-211ENST00000553882 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-211ENST00000553882 FAM47DPA6NHR8 397 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 KRT19P08727 400 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 RFC5P40937 340 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 CDKN2BP42772 138 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 VCPP55072 806 aaKnown RBP15.35■□□□□ 0.05
ACTN1-211ENST00000553882 NCALDP61601 193 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 PKN2Q16513 984 aaKnown RBP15.35■□□□□ 0.05
ACTN1-211ENST00000553882 DUOXA2Q1HG44 320 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 NCAPG2Q86XI2 1143 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 MAGEB18Q96M61 343 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 BTBD7Q9P203 1132 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 POLIQ9UNA4 740 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 ARL2BPQ9Y2Y0 163 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 MAFO75444 373 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-211ENST00000553882 ATP6V1G2O95670 118 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 ITGBL1O95965 494 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-211ENST00000553882 TAC1P20366 129 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 GDF10P55107 478 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 MGAT5Q09328 741 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 LAMTOR4Q0VGL1 99 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 PDIA2Q13087 525 aaKnown RBP15.35■□□□□ 0.05
ACTN1-211ENST00000553882 DNAJC3Q13217 504 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 OASLQ15646 514 aaKnown RBP15.35■□□□□ 0.05
ACTN1-211ENST00000553882 DENND1BQ6P3S1 775 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 ZPBP2Q6X784 338 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 EMC1Q8N766 993 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 TRAPPC12Q8WVT3 735 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 ACO2Q99798 780 aaKnown RBP15.35■□□□□ 0.05
ACTN1-211ENST00000553882 PITPNM3Q9BZ71 974 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 TRIM33Q9UPN9 1127 aa15.35■□□□□ 0.05
ACTN1-211ENST00000553882 LSM8O95777 96 aaKnown RBP15.34■□□□□ 0.05
ACTN1-211ENST00000553882 PRKCBP05771 671 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 PSMA2P25787 234 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 CDH8P55286 799 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 LACTBP83111 547 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-211ENST00000553882 MAPK6Q16659 721 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 SGSM1Q2NKQ1 1148 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 PTPN20Q4JDL3 420 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 TRABD2AQ86V40 505 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 RHPN2Q8IUC4 686 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 JOSD2Q8TAC2 188 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 NLRP4Q96MN2 994 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 NOD2Q9HC29 1040 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 CEP83Q9Y592 693 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 SOWAHBA6NEL2 793 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 OGTO15294 1046 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 B4GALT5O43286 388 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 ABHD2P08910 425 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 ASPAP45381 313 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 MCL1Q07820 350 aa15.34■□□□□ 0.05
ACTN1-211ENST00000553882 PIGHQ14442 188 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms