RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ACSF2Q96CM8 615 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-208ENST00000553868 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 BAG1Q99933 345 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-208ENST00000553868 ABHD10Q9NUJ1 306 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 WNT16Q9UBV4 365 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 MYO6Q9UM54 1294 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 ST3GAL5Q9UNP4 418 aa15.53■□□□□ 0.08
SHMT2-208ENST00000553868 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.53■□□□□ 0.087e-7■■□□□ 12.7
SHMT2-208ENST00000553868 TMEM191BP0C7N4 346 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 CXCL8P10145 99 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 SKIP12755 728 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 SKILP12757 684 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 UCHL3P15374 230 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 LAG3P18627 525 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 KCNA4P22459 653 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 DMWDQ09019 674 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 ARID5BQ14865 1188 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 WDR44Q5JSH3 913 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 KCNT2Q6UVM3 1135 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 C15orf39Q6ZRI6 1047 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 CEP120Q8N960 986 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 AUTS2Q8WXX7 1259 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 SYN2Q92777 582 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-208ENST00000553868 SPAG5Q96R06 1193 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 DNAJC7Q99615 494 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 IMPG2Q9BZV3 1241 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 FOXQ1Q9C009 403 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 GANQ9H2C0 597 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 RAB20Q9NX57 234 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 APEX2Q9UBZ4 518 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 ZKSCAN5Q9Y2L8 839 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 DERAQ9Y315 318 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 SIT1Q9Y3P8 196 aa15.52■□□□□ 0.08
SHMT2-208ENST00000553868 C2orf16Q68DN1 1984 aa15.52■□□□□ 0.07
SHMT2-208ENST00000553868 C4BPAP04003 597 aaKnown RBP15.51■□□□□ 0.07
SHMT2-208ENST00000553868 PIK3CAP42336 1068 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 RAB27AP51159 221 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 SMC1AQ14683 1233 aaKnown RBP15.51■□□□□ 0.07
SHMT2-208ENST00000553868 RRAGAQ7L523 313 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 OTOP3Q7RTS5 596 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 ZSCAN30Q86W11 494 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 TMTC1Q8IUR5 882 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 GPR161Q8N6U8 529 aaKnown RBP15.51■□□□□ 0.07
SHMT2-208ENST00000553868 ZNF830Q96NB3 372 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-208ENST00000553868 NT5C1BQ96P26 610 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 ADAM2Q99965 735 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 SMG5Q9UPR3 1016 aaKnown RBP15.51■□□□□ 0.07
SHMT2-208ENST00000553868 R3HCC1Q9Y3T6 440 aaKnown RBP15.51■□□□□ 0.07
SHMT2-208ENST00000553868 C2CD2Q9Y426 696 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-208ENST00000553868 COL4A3Q01955 1670 aa15.51■□□□□ 0.07
SHMT2-208ENST00000553868 LACTBL1A8MY62 500 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 ARHGAP6O43182 974 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 XPOTO43592 962 aaKnown RBP15.5■□□□□ 0.07
SHMT2-208ENST00000553868 NOL4O94818 638 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 CCDC172P0C7W6 258 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 FECHP22830 423 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 MSNP26038 577 aaKnown RBP15.5■□□□□ 0.07
SHMT2-208ENST00000553868 CCZ1BP86790 482 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 CCZ1P86791 482 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-208ENST00000553868 TFAMQ00059 246 aaKnown RBP15.5■□□□□ 0.07
SHMT2-208ENST00000553868 LRMPQ12912 555 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 TRPC3Q13507 836 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 TMEM132DQ14C87 1099 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 SLC10A6Q3KNW5 377 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 UBXN11Q5T124 520 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 SFMBT2Q5VUG0 894 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 PDXDC1Q6P996 788 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 CYP26C1Q6V0L0 522 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 CCDC149Q6ZUS6 474 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 ENOSF1Q7L5Y1 443 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 LMO3Q8TAP4 145 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 GPR152Q8TDT2 470 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 TAS1R2Q8TE23 839 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 BAP1Q92560 729 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 ZNF516Q92618 1163 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 TRAIPQ9BWF2 469 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 EIF2AQ9BY44 585 aaKnown RBP15.5■□□□□ 0.07
SHMT2-208ENST00000553868 KCNF1Q9H3M0 494 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 SIX2Q9NPC8 291 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 NLRC4Q9NPP4 1024 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 C1orf112Q9NSG2 853 aa15.5■□□□□ 0.07
SHMT2-208ENST00000553868 CEP295Q9C0D2 2601 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 CNOT1A5YKK6 2376 aaKnown RBP15.49■□□□□ 0.07
SHMT2-208ENST00000553868 EPHB6O15197 1021 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 HLA-DRAP01903 254 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 HNRNPH3P31942 346 aaKnown RBP15.49■□□□□ 0.07
SHMT2-208ENST00000553868 STAT1P42224 750 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 MFAP3P55082 362 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 WNT7BP56706 349 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 CDK17Q00537 523 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 KRT17Q04695 432 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 GOLGA8FQ08AF8 430 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 GOLGA8DPQ0D2H9 430 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 NCOA4Q13772 614 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 RAPGEF1Q13905 1077 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 TDRD10Q5VZ19 366 aaKnown RBP15.49■□□□□ 0.07
SHMT2-208ENST00000553868 LMBRD2Q68DH5 695 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-208ENST00000553868 SMYD5Q6GMV2 418 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 TRAPPC11Q7Z392 1133 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms