RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 FBLP22087 321 aaKnown RBP4.2□□□□□ -1.74
VRK1-202ENST00000553683 HTR1BP28222 390 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 NDUFV1P49821 464 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 ARFIP2P53365 341 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 WNT3P56703 355 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 SOX8P57073 446 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 SIM1P81133 766 aaPredicted RBP4.2□□□□□ -1.74
VRK1-202ENST00000553683 ZNF267Q14586 743 aaPredicted RBP4.2□□□□□ -1.74
VRK1-202ENST00000553683 CD300EQ496F6 205 aaPredicted RBP4.2□□□□□ -1.74
VRK1-202ENST00000553683 KHDC1LQ5JSQ8 128 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 TEDDM1Q5T9Z0 273 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 GRASPQ7Z6J2 395 aaPredicted RBP4.2□□□□□ -1.74
VRK1-202ENST00000553683 DAAM2Q86T65 1068 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 DNAJC10Q8IXB1 793 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 MAGEB6Q8N7X4 407 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 ACTRT2Q8TDY3 377 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 TIMP4Q99727 224 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 ACO2Q99798 780 aaKnown RBP4.2□□□□□ -1.74
VRK1-202ENST00000553683 DUSP26Q9BV47 211 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 SPATA5L1Q9BVQ7 753 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 RIOX1Q9H6W3 641 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 KLC4Q9NSK0 619 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 GOLGA6AQ9NYA3 693 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 HESX1Q9UBX0 185 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 ZNHIT2Q9UHR6 403 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 COX11Q9Y6N1 276 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 FAM227AF5H4B4 570 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 F5H697 171 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 GCOM1H8Y6P7 765 aaPredicted RBP4.19□□□□□ -1.74
VRK1-202ENST00000553683 CTNND1O60716 968 aaKnown RBP4.19□□□□□ -1.74
VRK1-202ENST00000553683 DNAJB5O75953 348 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 AHSGP02765 367 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 HRGP04196 525 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 PPIFP30405 207 aaKnown RBP4.19□□□□□ -1.74
VRK1-202ENST00000553683 GRIA3P42263 894 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 GCLCP48506 637 aaPredicted RBP4.19□□□□□ -1.74
VRK1-202ENST00000553683 TOB1P50616 345 aaPredicted RBP4.19□□□□□ -1.74
VRK1-202ENST00000553683 LOXL3P58215 753 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 MC2RQ01718 297 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 KAZNQ674X7 775 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 TAF2Q6P1X5 1199 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 SH2D3CQ8N5H7 860 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 B3GALNT2Q8NCR0 500 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 PLBD2Q8NHP8 589 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 SLC30A5Q8TAD4 765 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 SUCLG2Q96I99 432 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 PBKQ96KB5 322 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 MRGPRX1Q96LB2 322 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 LRFN3Q9BTN0 628 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 DPH1Q9BZG8 443 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 AMBRA1Q9C0C7 1298 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 SLAMF7Q9NQ25 335 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 ANLNQ9NQW6 1124 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 TLK1Q9UKI8 766 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 AGAP1Q9UPQ3 857 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 ENTPD2Q9Y5L3 495 aa4.19□□□□□ -1.74
VRK1-202ENST00000553683 COL11A2P13942 1736 aaPredicted RBP4.18□□□□□ -1.74
VRK1-202ENST00000553683 KIAA0355O15063 1070 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 PHGDHO43175 533 aaKnown RBP4.18□□□□□ -1.74
VRK1-202ENST00000553683 TSPAN6O43657 245 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 KIF20AO95235 890 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 SCGB1D2O95969 90 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 NUDT3O95989 172 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 PPP3CBP16298 524 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 HDCP19113 662 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 CLK3P49761 638 aaKnown RBP4.18□□□□□ -1.74
VRK1-202ENST00000553683 NANOS3P60323 173 aaKnown RBP4.18□□□□□ -1.74
VRK1-202ENST00000553683 SATB1Q01826 763 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 NHLH1Q02575 133 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 EXOSC9Q06265 439 aaKnown RBP4.18□□□□□ -1.74
VRK1-202ENST00000553683 IQCB1Q15051 598 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 LONRF3Q496Y0 759 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 ICE2Q659A1 982 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 SRGAP1Q7Z6B7 1085 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 DTX2Q86UW9 622 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 ADGRG3Q86Y34 549 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 KIAA0319LQ8IZA0 1049 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 FAM98AQ8NCA5 519 aaKnown RBP4.18□□□□□ -1.74
VRK1-202ENST00000553683 NSUN7Q8NE18 718 aaKnown RBP4.18□□□□□ -1.74
VRK1-202ENST00000553683 JDP2Q8WYK2 163 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 LPIN2Q92539 896 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 FAM136AQ96C01 138 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 FBXL20Q96IG2 436 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 CRAMP1Q96RY5 1269 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 TRIM54Q9BYV2 358 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 FAM204AQ9H8W3 233 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 SEMA4GQ9NTN9 838 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 PCDHA6Q9UN73 950 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 L1RE1Q9UN81 338 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 SH2B3Q9UQQ2 575 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 SALL3Q9BXA9 1300 aa4.18□□□□□ -1.74
VRK1-202ENST00000553683 A0A1W2PPL8 197 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 CAPN8A6NHC0 703 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 ISM1B1AKI9 464 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 M0QYG6 137 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 TLR5O60602 858 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 NXPH3O95157 252 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 ONECUT2O95948 504 aa4.17□□□□□ -1.74
VRK1-202ENST00000553683 CD6P30203 668 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms