RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 CDR2Q01850 454 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 TRIM29Q14134 588 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 KRT31Q15323 416 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 TNFAIP8L3Q5GJ75 292 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 CYP4A22Q5TCH4 519 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 C6orf163Q5TEZ5 329 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 SHC4Q6S5L8 630 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 MIER3Q7Z3K6 550 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 KRT28Q7Z3Y7 464 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 SPARTQ8N0X7 666 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 CLASRPQ8N2M8 674 aaKnown RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 ZNF713Q8N859 430 aaPredicted RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 CEP70Q8NHQ1 597 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 TMA16Q96EY4 203 aaKnown RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 MAGEB18Q96M61 343 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 CCDC138Q96M89 665 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 TTC1Q99614 292 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 HEPHQ9BQS7 1158 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 TRIM56Q9BRZ2 755 aaKnown RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 TBC1D10AQ9BXI6 508 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 CEP41Q9BYV8 373 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 RBM38Q9H0Z9 239 aaKnown RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 TMEM60Q9H2L4 133 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 Q9H521 79 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 DENND2DQ9H6A0 471 aaPredicted RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 CD209Q9NNX6 404 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 KRT82Q9NSB4 513 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 TYW1Q9NV66 732 aaKnown RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 TRIM10Q9UDY6 481 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 VTI1BQ9UEU0 232 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 RWDD2AQ9UIY3 292 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 APOBEC2Q9Y235 224 aaKnown RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 NOC2LQ9Y3T9 749 aaKnown RBP7.4□□□□□ -1.22
FCF1-203ENST00000553615 NOX1Q9Y5S8 564 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 DISP2A7MBM2 1401 aa7.4□□□□□ -1.22
FCF1-203ENST00000553615 ATAD5Q96QE3 1844 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 WDR19Q8NEZ3 1342 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 PITPNM2Q9BZ72 1349 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 PNMA6EA0A0J9YXQ4 647 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 ANKRD34BA5PLL1 514 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 MEGF11A6BM72 1044 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 H3BNX3 289 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 CHL1O00533 1208 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 HAT1O14929 419 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 MCF2LO15068 1137 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 SNX2O60749 519 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 OPHN1O60890 802 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 PHF2O75151 1096 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 FKBP6O75344 327 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 TRMUO75648 421 aaKnown RBP7.39□□□□□ -1.23
FCF1-203ENST00000553615 CTDNEP1O95476 244 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 PROCP04070 461 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 UBTFL1P0CB47 393 aaPredicted RBP7.39□□□□□ -1.23
FCF1-203ENST00000553615 OCM2P0CE71 109 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 OCMP0CE72 109 aaPredicted RBP7.39□□□□□ -1.23
FCF1-203ENST00000553615 CHRNB1P11230 501 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 GLB1P16278 677 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 ZNF16P17020 682 aaPredicted RBP7.39□□□□□ -1.23
FCF1-203ENST00000553615 GM2AP17900 193 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 IL4RP24394 825 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 TNNI2P48788 182 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 CHN2P52757 468 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 GJA9P57773 515 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 NAA20P61599 178 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 AP2B1P63010 937 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 COG7P83436 770 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 STRN3Q13033 797 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 DPYSQ14117 519 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 COG2Q14746 738 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 PTPAQ15257 358 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 CNGA2Q16280 664 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 USP41Q3LFD5 358 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 SGO2Q562F6 1265 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 EXOSC6Q5RKV6 272 aaKnown RBP7.39□□□□□ -1.23
FCF1-203ENST00000553615 TMEM63BQ5T3F8 832 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 AGAP9Q5VTM2 703 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 SPOPLQ6IQ16 392 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 AAGABQ6PD74 315 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 AGMOQ6ZNB7 445 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 FRA10AC1Q70Z53 315 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 KRT27Q7Z3Y8 459 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 FAM20CQ8IXL6 584 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 THEMISQ8N1K5 641 aaPredicted RBP7.39□□□□□ -1.23
FCF1-203ENST00000553615 ATP6V0D2Q8N8Y2 350 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 USP38Q8NB14 1042 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 SUPT20HQ8NEM7 779 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 CHPT1Q8WUD6 406 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 CKAP2Q8WWK9 683 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 RASSF5Q8WWW0 418 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 RMDN1Q96DB5 314 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 RUNDC3BQ96NL0 473 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 NECAB3Q96P71 396 aaPredicted RBP7.39□□□□□ -1.23
FCF1-203ENST00000553615 INPP4AQ96PE3 977 aaPredicted RBP7.39□□□□□ -1.23
FCF1-203ENST00000553615 LRRC37BQ96QE4 947 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 PRMT1Q99873 361 aaKnown RBP7.39□□□□□ -1.23
FCF1-203ENST00000553615 AIFM2Q9BRQ8 373 aa7.39□□□□□ -1.23
FCF1-203ENST00000553615 UQCC2Q9BRT2 126 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms