RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 MCCP23508 829 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 GJA4P35212 333 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 GCLCP48506 637 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-220ENST00000553491 SESN3P58005 492 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 HERVK_113P62684 666 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 KLRC3Q07444 240 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 MOGSQ13724 837 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 COG2Q14746 738 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 CCDC96Q2M329 555 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 FAM26FQ5R3K3 315 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 CATSPEREQ5SY80 951 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 FAM83BQ5T0W9 1011 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 AKNAD1Q5T1N1 836 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 SLFN13Q68D06 897 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 ESRP1Q6NXG1 681 aaKnown RBP5.44□□□□□ -1.54
ATXN3-220ENST00000553491 C17orf99Q6UX52 265 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 CATSPERGQ6ZRH7 1159 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 CHST3Q7LGC8 479 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 PASD1Q8IV76 773 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 RAVER1Q8IY67 606 aaKnown RBP5.44□□□□□ -1.54
ATXN3-220ENST00000553491 CPXCR1Q8N123 301 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 GPRC5AQ8NFJ5 357 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 CEP95Q96GE4 821 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 ABHD8Q96I13 439 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 SCYL1Q96KG9 808 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 KIAA1683Q9H0B3 1180 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 RNF41Q9H4P4 317 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-220ENST00000553491 ZMAT4Q9H898 229 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 VAT1LQ9HCJ6 419 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 ZCCHC17Q9NP64 241 aaKnown RBP5.44□□□□□ -1.54
ATXN3-220ENST00000553491 ACSS2Q9NR19 701 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 TRHDEQ9UKU6 1024 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 NAP1L2Q9ULW6 460 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-220ENST00000553491 TMX2Q9Y320 296 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 ERICH2A1L162 156 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 LCHNA4D1U4 455 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 TMEM232C9JQI7 657 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 K7ESF4 209 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 DDX3XO00571 662 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 DHX16O60231 1041 aaKnown RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 ZBED4O75132 1171 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 COL6A1P12109 1028 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 FAHP16930 419 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 VCAM1P19320 739 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 CYP2B6P20813 491 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 SDHAP31040 664 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 HOXA7P31268 230 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 BUD31P41223 144 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 MLLT6P55198 1093 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 SNAP25P60880 206 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 ERVK-21P61565 698 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 PHC1P78364 1004 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 CCNA1P78396 465 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 PKN2Q16513 984 aaKnown RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 SLC9C1Q4G0N8 1177 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 PAN2Q504Q3 1202 aaKnown RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 KIAA1755Q5JYT7 1200 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 GPR158Q5T848 1215 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 SYDE2Q5VT97 1194 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 ERICH6BQ5W0A0 696 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 RALYLQ86SE5 291 aaKnown RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 IQCA1Q86XH1 822 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 TICAM2Q86XR7 235 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 TXNDC5Q8NBS9 432 aaKnown RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 ESR2Q92731 530 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 SMAD5Q99717 465 aaKnown RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 UBAC1Q9BSL1 405 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 YIPF4Q9BSR8 244 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 KRT23Q9C075 422 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 VCPKMTQ9H867 229 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 KAT14Q9H8E8 782 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 FBXO28Q9NVF7 368 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 MTMR4Q9NYA4 1195 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 NYAP2Q9P242 653 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 GABRQQ9UN88 632 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 PTPN22Q9Y2R2 807 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 SLC45A1Q9Y2W3 748 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 RBM8AQ9Y5S9 174 aaKnown RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 FRMPD2Q68DX3 1309 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 MYPNQ86TC9 1320 aa5.43□□□□□ -1.54
ATXN3-220ENST00000553491 KIAA0100Q14667 2235 aaKnown RBP5.43□□□□□ -1.54
ATXN3-220ENST00000553491 PRAMEF25A6NGN4 478 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 IFIT3O14879 490 aaKnown RBP5.42□□□□□ -1.54
ATXN3-220ENST00000553491 WDR46O15213 610 aaKnown RBP5.42□□□□□ -1.54
ATXN3-220ENST00000553491 FOXP2O15409 715 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 ORC4O43929 436 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 MARCH6O60337 910 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 PARNO95453 639 aaKnown RBP5.42□□□□□ -1.54
ATXN3-220ENST00000553491 NDUFB10O96000 172 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 CYP17A1P05093 508 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 TOP1P11387 765 aaKnown RBP5.42□□□□□ -1.54
ATXN3-220ENST00000553491 SYN1P17600 705 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 LSP1P33241 339 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 SLC16A2P36021 539 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 SLC1A4P43007 532 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 SOX10P56693 466 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 FAPQ12884 760 aa5.42□□□□□ -1.54
ATXN3-220ENST00000553491 LRRC32Q14392 662 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms