RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 A8MXQ7 604 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 HOXA2O43364 376 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 DDHD2O94830 711 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 EN2P19622 333 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-206ENST00000553447 GNL1P36915 607 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-206ENST00000553447 NOP2P46087 812 aaKnown RBP18.69■□□□□ 0.58
PSEN1-206ENST00000553447 IKBKEQ14164 716 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 TCEAL1Q15170 157 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 CNGA2Q16280 664 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 IFI16Q16666 785 aaKnown RBP18.69■□□□□ 0.58
PSEN1-206ENST00000553447 DENND1BQ6P3S1 775 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 DCLRE1AQ6PJP8 1040 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 CD300LGQ6UXG3 332 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 ACOT1Q86TX2 421 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 OSTM1Q86WC4 334 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 ZNF280BQ86YH2 543 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 PHF13Q86YI8 300 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-206ENST00000553447 NPAS4Q8IUM7 802 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 COLGALT2Q8IYK4 626 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 ABI1Q8IZP0 508 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 TMEM35BQ8NCS4 154 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 ZNF653Q96CK0 615 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 TRIM11Q96F44 468 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 ZNF518BQ9C0D4 1074 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 DNAI2Q9GZS0 605 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 LHX5Q9H2C1 402 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.69■□□□□ 0.58
PSEN1-206ENST00000553447 CEP83Q9Y592 693 aa18.69■□□□□ 0.58
PSEN1-206ENST00000553447 O00370 1275 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 B4GALT3O60512 393 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 B3GAT3O94766 335 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 ITGB8P26012 769 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 RNASELQ05823 741 aaKnown RBP18.68■□□□□ 0.58
PSEN1-206ENST00000553447 STILQ15468 1287 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 TIGD5Q53EQ6 642 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 WSCD1Q658N2 575 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 MON1BQ7L1V2 547 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 RHOT2Q8IXI1 618 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 MCOLN2Q8IZK6 566 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 CRYBG2Q8N1P7 616 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 TMEM86AQ8N2M4 240 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 C1orf131Q8NDD1 294 aaKnown RBP18.68■□□□□ 0.58
PSEN1-206ENST00000553447 SLC35G2Q8TBE7 412 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 CASD1Q96PB1 797 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 FAM193BQ96PV7 902 aaPredicted RBP18.68■□□□□ 0.58
PSEN1-206ENST00000553447 NAPGQ99747 312 aaPredicted RBP18.68■□□□□ 0.58
PSEN1-206ENST00000553447 GTF3C4Q9UKN8 822 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 STXBP5LQ9Y2K9 1186 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 PCDHGC5Q9Y5F6 944 aa18.68■□□□□ 0.58
PSEN1-206ENST00000553447 CTAGE9A4FU28 777 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 GABRDO14764 452 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 HCRTO43612 131 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 MICAL2O94851 1124 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 CYP1A2P05177 515 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 MYBL1P10243 752 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 RAG1P15918 1043 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 LMO2P25791 158 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 GATMP50440 423 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 PAN2Q504Q3 1202 aaKnown RBP18.67■□□□□ 0.58
PSEN1-206ENST00000553447 MFSD5Q6N075 450 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 LCLAT1Q6UWP7 414 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.67■□□□□ 0.58
PSEN1-206ENST00000553447 WDTC1Q8N5D0 677 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 TPCN2Q8NHX9 752 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 RSPH1Q8WYR4 309 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 VCPIP1Q96JH7 1222 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 DPEP3Q9H4B8 488 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 OSGEPQ9NPF4 335 aa18.67■□□□□ 0.58
PSEN1-206ENST00000553447 AVENQ9NQS1 362 aaPredicted RBP18.67■□□□□ 0.58
PSEN1-206ENST00000553447 CNOT8Q9UFF9 292 aaKnown RBP18.67■□□□□ 0.58
PSEN1-206ENST00000553447 GRID2IPA4D2P6 1211 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 TMEM189-UBE2V1I3L0A0 370 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 M0QZQ0 153 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 ATMINO43313 823 aaPredicted RBP18.66■□□□□ 0.58
PSEN1-206ENST00000553447 PALMO75781 387 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 KIF4AO95239 1232 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 PDGFRBP09619 1106 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 ODC1P11926 461 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 BRCC3P46736 316 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 HADHBP55084 474 aaKnown RBP18.66■□□□□ 0.58
PSEN1-206ENST00000553447 C1QBPQ07021 282 aaKnown RBP18.66■□□□□ 0.58
PSEN1-206ENST00000553447 PTP4A2Q12974 167 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 ARHGAP17Q68EM7 881 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 MMS22LQ6ZRQ5 1243 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 TMEM199Q8N511 208 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 C12orf29Q8N999 325 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 SPATA18Q8TC71 538 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 CALR3Q96L12 384 aaKnown RBP18.66■□□□□ 0.58
PSEN1-206ENST00000553447 C11orf70Q9BRQ4 267 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 MRPL9Q9BYD2 267 aaKnown RBP18.66■□□□□ 0.58
PSEN1-206ENST00000553447 ADAM22Q9P0K1 906 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 CTTNBP2NLQ9P2B4 639 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 COG5Q9UP83 839 aa18.66■□□□□ 0.58
PSEN1-206ENST00000553447 ABHD14A-ACY1A0A1B0GW23 586 aa18.65■□□□□ 0.58
PSEN1-206ENST00000553447 I3L4J1 428 aa18.65■□□□□ 0.58
PSEN1-206ENST00000553447 M0QYV0 167 aa18.65■□□□□ 0.58
PSEN1-206ENST00000553447 MTA2O94776 668 aa18.65■□□□□ 0.58
PSEN1-206ENST00000553447 ITGB1P05556 798 aa18.65■□□□□ 0.58
PSEN1-206ENST00000553447 CSF2RAP15509 400 aa18.65■□□□□ 0.58
PSEN1-206ENST00000553447 MMP8P22894 467 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms