RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 TNPO1Q92973 898 aaKnown RBP6.05□□□□□ -1.44
ATXN3-217ENST00000553287 MVB12AQ96EY5 273 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 SMOQ99835 787 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 VKORC1Q9BQB6 163 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 WDCPQ9H6R7 721 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 RLIMQ9NVW2 624 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 KIF14Q15058 1648 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 ABCA6Q8N139 1617 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 DIP2CQ9Y2E4 1556 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 ZNF785A8K8V0 405 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 POLRMTO00411 1230 aaKnown RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 YY2O15391 372 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 CT47B1P0C2W7 299 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 SRGNP10124 158 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 NCLP19338 710 aaKnown RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 LPOP22079 712 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 FOLR3P41439 243 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 PIK3CGP48736 1102 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 HABP2Q14520 560 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 TTF1Q15361 905 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 PREPLQ4J6C6 727 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 VWA1Q6PCB0 445 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 TSHZ1Q6ZSZ6 1077 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 NUP88Q99567 741 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 MRPL46Q9H2W6 279 aaKnown RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 ALG13Q9NP73 1137 aaKnown RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 KMT5AQ9NQR1 393 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 LMBRD1Q9NUN5 540 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 INSL6Q9Y581 213 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 PCDHA1Q9Y5I3 950 aa6.04□□□□□ -1.44
ATXN3-217ENST00000553287 SUPT6HQ7KZ85 1726 aaKnown RBP6.04□□□□□ -1.44
ATXN3-217ENST00000553287 IQSEC2Q5JU85 1478 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 MYO5CQ9NQX4 1742 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 PLCH2O75038 1416 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 E7ENX8 843 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 H3BUI4 141 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 ABLIM3O94929 683 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 TYRP14679 529 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 PTH2RP49190 550 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 ZNF135P52742 658 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-217ENST00000553287 SIM1P81133 766 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-217ENST00000553287 MC2RQ01718 297 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 TAP2Q03519 686 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 MICALCLQ6ZW33 695 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 GRAMD1CQ8IYS0 662 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 ADGRG5Q8IZF4 528 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 POC1BQ8TC44 478 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 SNX19Q92543 992 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 MAP3K14Q99558 947 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 GPR35Q9HC97 309 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 PNPOQ9NVS9 261 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 FOXJ2Q9P0K8 574 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 TLK1Q9UKI8 766 aa6.03□□□□□ -1.44
ATXN3-217ENST00000553287 SETD1BQ9UPS6 1966 aaKnown RBP6.02□□□□□ -1.45
ATXN3-217ENST00000553287 TRAPPC8Q9Y2L5 1435 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 F5H697 171 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 MATN4O95460 622 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 CHEK2O96017 543 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 RARBP10826 455 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 MCL1Q07820 350 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 HLXQ14774 488 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-217ENST00000553287 KIF22Q14807 665 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 TMPRSS9Q7Z410 1059 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 USP37Q86T82 979 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 ZNF575Q86XF7 245 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 PPP1R3BQ86XI6 285 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 ADGRG3Q86Y34 549 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 TOR1AIP2Q8NFQ8 470 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 ACTRT2Q8TDY3 377 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 LPIN2Q92539 896 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 HPS3Q969F9 1004 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 FBXL20Q96IG2 436 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 PDLIM2Q96JY6 352 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 FAM167AQ96KS9 214 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 DUSP26Q9BV47 211 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 KIAA1586Q9HCI6 787 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 FEZ2Q9UHY8 353 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-217ENST00000553287 ZDHHC8Q9ULC8 765 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 AGAP1Q9UPQ3 857 aa6.02□□□□□ -1.45
ATXN3-217ENST00000553287 CLTCQ00610 1675 aaKnown RBP6.01□□□□□ -1.45
ATXN3-217ENST00000553287 ARHGAP5Q13017 1502 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 VPS4BO75351 444 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 AHSGP02765 367 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 RAB27AP51159 221 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 HNRNPMP52272 730 aaKnown RBP eCLIP6.01□□□□□ -1.45
ATXN3-217ENST00000553287 ATAT1Q5SQI0 421 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 IFIT1BQ5T764 474 aaKnown RBP6.01□□□□□ -1.45
ATXN3-217ENST00000553287 KAZNQ674X7 775 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 DPY19L2P1Q6NXN4 242 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 FBXO42Q6P3S6 717 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 JPH3Q8WXH2 748 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-217ENST00000553287 SIK2Q9H0K1 926 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 MRPS18AQ9NVS2 196 aaKnown RBP6.01□□□□□ -1.45
ATXN3-217ENST00000553287 RGS17Q9UGC6 210 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-217ENST00000553287 ZNF180Q9UJW8 692 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 NR2E3Q9Y5X4 410 aa6.01□□□□□ -1.45
ATXN3-217ENST00000553287 MYO3AQ8NEV4 1616 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 ALKQ9UM73 1620 aa6□□□□□ -1.45
ATXN3-217ENST00000553287 SETD1AO15047 1707 aaKnown RBP6□□□□□ -1.45
ATXN3-217ENST00000553287 COL11A2P13942 1736 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms