RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 SKIP12755 728 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 GAP43P17677 238 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 BGNP21810 368 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 ARSEP51690 589 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 GDF10P55107 478 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 ARL4CP56559 192 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 WNT7BP56706 349 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 TMEM62Q0P6H9 643 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 GPS1Q13098 491 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 PRKG1Q13976 671 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 DLGAP5Q15398 846 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 CLUL1Q15846 466 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 RASIP1Q5U651 963 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 ACAD10Q6JQN1 1059 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 PAOXQ6QHF9 649 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 NLRX1Q86UT6 975 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 IGDCC3Q8IVU1 814 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 VPS52Q8N1B4 723 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 NLGN1Q8N2Q7 840 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 EFCAB3Q8N7B9 438 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 PDCD7Q8N8D1 485 aaKnown RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 RBM15BQ8NDT2 890 aaKnown RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 ACER1Q8TDN7 264 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 FAM163AQ96GL9 167 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 NSL1Q96IY1 281 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 SERAC1Q96JX3 654 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 OSBPL8Q9BZF1 889 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 C20orf27Q9GZN8 174 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 UNC45AQ9H3U1 944 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 SYNCQ9H7C4 482 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 STK32BQ9NY57 414 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 HSPBP1Q9NZL4 362 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 RGS17Q9UGC6 210 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 RABGEF1Q9UJ41 708 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MYPNQ86TC9 1320 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MAGEA13PA6NCF6 341 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MEI4A8MW99 385 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 FCHO1O14526 889 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 FAM155BO75949 473 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 TOP3BO95985 862 aaKnown RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 ENO1P06733 434 aaKnown RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 UNGP13051 313 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 IL1R1P14778 569 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 ANPEPP15144 967 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 EIF2AK2P19525 551 aaKnown RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MXI1P50539 228 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 SOX10P56693 466 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 RPL7AP62424 266 aaKnown RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 KDSRQ06136 332 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 TTLL12Q14166 644 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 PDCD2Q16342 344 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 NFIL3Q16649 462 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 LPCAT4Q643R3 524 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 SPOPLQ6IQ16 392 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 RIPOR1Q6ZS17 1223 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 TMEM179Q6ZVK1 233 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MIER3Q7Z3K6 550 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 TRIM74Q86UV6 250 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 TRIM73Q86UV7 250 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 SATL1Q86VE3 508 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 RELL1Q8IUW5 271 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MCOLN2Q8IZK6 566 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MCUR1Q96AQ8 359 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 FAM20AQ96MK3 541 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 GBP5Q96PP8 586 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 TRAPPC9Q96Q05 1148 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 ASCC2Q9H1I8 757 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MANSC1Q9H8J5 431 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 EHMT1Q9H9B1 1298 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 SAR1AQ9NR31 198 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 ANKFY1Q9P2R3 1169 aa5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MARCOQ9UEW3 520 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-214ENST00000552783 MYH9P35579 1960 aaKnown RBP5.1□□□□□ -1.59
LIMA1-214ENST00000552783 WNK3Q9BYP7 1800 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 MYOCOSA0A1B0GUC4 107 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 B2RBV5 119 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 ZNF862O60290 1169 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 ABCB7O75027 752 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 BAG2O95816 211 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 IFNB1P01574 187 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 FAM163BP0C2L3 166 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 POTEJP0CG39 1038 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 KITP10721 976 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 CD1EP15812 388 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 NPR1P16066 1061 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 GLRA2P23416 452 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 PGM1P36871 562 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 CDC16Q13042 620 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 MYBPC3Q14896 1274 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 CLEC16AQ2KHT3 1053 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 SFT2D3Q587I9 215 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 FAM102BQ5T8I3 360 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 KRT27Q7Z3Y8 459 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 SP8Q8IXZ3 490 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 RIBC1Q8N443 379 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-214ENST00000552783 PYDC1Q8WXC3 89 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 FAM111AQ96PZ2 611 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 PHF12Q96QT6 1004 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 LXNQ9BS40 222 aa5.1□□□□□ -1.59
LIMA1-214ENST00000552783 CLIC5Q9NZA1 410 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms