RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 ZNF572Q7Z3I7 529 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-223ENST00000552480 CTAGE6Q86UF2 777 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 RTN4RL1Q86UN2 441 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-223ENST00000552480 CREG2Q8IUH2 290 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 CTAGE4Q8IX94 777 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 ADGRF2Q8IZF7 708 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 WDTC1Q8N5D0 677 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 MSANTD4Q8NCY6 345 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 OR6B3Q8NGW1 331 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 COG1Q8WTW3 980 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 KBTBD7Q8WVZ9 684 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 GOLGA1Q92805 767 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 ARMC5Q96C12 935 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 DDX27Q96GQ7 796 aaKnown RBP13.47□□□□□ -0.25
CACNB3-223ENST00000552480 HES6Q96HZ4 224 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 PBKQ96KB5 322 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 RPGRIP1Q96KN7 1286 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 CAPZA3Q96KX2 299 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 UROC1Q96N76 676 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 SNX25Q9H3E2 840 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 MRPL47Q9HD33 250 aaKnown RBP13.47□□□□□ -0.25
CACNB3-223ENST00000552480 RNF14Q9UBS8 474 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 L1RE1Q9UN81 338 aa13.47□□□□□ -0.25
CACNB3-223ENST00000552480 PACSIN2Q9UNF0 486 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-223ENST00000552480 A8MXQ7 604 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 MIF4GDA9UHW6 222 aaKnown RBP13.46□□□□□ -0.25
CACNB3-223ENST00000552480 M0QYV0 167 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 PQBP1O60828 265 aaKnown RBP13.46□□□□□ -0.25
CACNB3-223ENST00000552480 NBNO60934 754 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 FGFR1P11362 822 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 COL6A1P12109 1028 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 PAX3P23760 479 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 AFF1P51825 1210 aaKnown RBP13.46□□□□□ -0.25
CACNB3-223ENST00000552480 GSCP56915 257 aaPredicted RBP13.46□□□□□ -0.25
CACNB3-223ENST00000552480 MESDQ14696 234 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 PLEKHG4Q58EX7 1191 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 C1orf53Q5VUE5 145 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 ARHGAP17Q68EM7 881 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 RSRC2Q7L4I2 434 aaKnown RBP13.46□□□□□ -0.25
CACNB3-223ENST00000552480 ERICH1Q86X53 443 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 CRYBG2Q8N1P7 616 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 APBB2Q92870 758 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 TOX2Q96NM4 488 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 PSMB7Q99436 277 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 PARVAQ9NVD7 372 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 CHORDC1Q9UHD1 332 aaPredicted RBP13.46□□□□□ -0.25
CACNB3-223ENST00000552480 LCMT1Q9UIC8 334 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 ANAPC7Q9UJX3 599 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 STRIP2Q9ULQ0 834 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 NME7Q9Y5B8 376 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 ALG6Q9Y672 507 aa13.46□□□□□ -0.25
CACNB3-223ENST00000552480 MYH10P35580 1976 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 TMEM110-MUSTN1A8MSY1 372 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 DCDC2CA8MYV0 355 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 CYB561D2O14569 222 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 KCNK3O14649 394 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 DDX3YO15523 660 aaKnown RBP13.45□□□□□ -0.26
CACNB3-223ENST00000552480 PARNO95453 639 aaKnown RBP13.45□□□□□ -0.26
CACNB3-223ENST00000552480 SETSIPP0DME0 302 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 IBSPP21815 317 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-223ENST00000552480 CXCR5P32302 372 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 GNL1P36915 607 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-223ENST00000552480 PAFAH1B1P43034 410 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 CLCNKBP51801 687 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 ITIH3Q06033 890 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 TUSC3Q13454 348 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 MAMLD1Q13495 774 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 GPNMBQ14956 572 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 PKN2Q16513 984 aaKnown RBP13.45□□□□□ -0.26
CACNB3-223ENST00000552480 UPP1Q16831 310 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 GOLGA7BQ2TAP0 167 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 C2CD6Q53TS8 623 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 CCDC181Q5TID7 509 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 GLB1LQ6UWU2 654 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 ACOT1Q86TX2 421 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 TMEM86AQ8N2M4 240 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 PDCL2Q8N4E4 241 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 ANKLE1Q8NAG6 615 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 UBXN4Q92575 508 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 SEPT8Q92599 483 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 SENP8Q96LD8 212 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 SELENOOQ9BVL4 669 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 WNT8AQ9H1J5 351 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 ELAC1Q9H777 363 aaKnown RBP13.45□□□□□ -0.26
CACNB3-223ENST00000552480 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.45□□□□□ -0.26
CACNB3-223ENST00000552480 CYTH4Q9UIA0 394 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 TSPAN16Q9UKR8 245 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 INPP5FQ9Y2H2 1132 aa13.45□□□□□ -0.26
CACNB3-223ENST00000552480 V9GYY5 206 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-223ENST00000552480 TCRBV5S1A1TA0A578 114 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 CASTOR2A6NHX0 329 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 PDE2AO00408 941 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-223ENST00000552480 CAPN15O75808 1086 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 POMCP01189 267 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 HSPA1AP0DMV8 641 aaKnown RBP13.44□□□□□ -0.26
CACNB3-223ENST00000552480 HSPA1BP0DMV9 641 aaKnown RBP13.44□□□□□ -0.26
CACNB3-223ENST00000552480 COMTP21964 271 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 CTNNA2P26232 953 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 SLC1A1P43005 524 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 GPD2P43304 727 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms