RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 CEACAM1P13688 526 aa12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 ZSCAN20P17040 1043 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 PSMC5P62195 406 aa12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 SPATA31D4Q6ZUB0 917 aa12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 CREBRFQ8IUR6 639 aa12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 TRIM59Q8IWR1 403 aa12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 PLCB1Q9NQ66 1216 aa12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 TRMT1Q9NXH9 659 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 RGL1Q9NZL6 768 aa12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 WRAP73Q9P2S5 460 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.93□□□□□ -0.34
RBFOX1-214ENST00000552089 ZNF462Q96JM2 2506 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 SSU72P8A0A1W2PR75 194 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 ZBTB42B2RXF5 422 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 EIF3CLB5ME19 914 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 TEX28O15482 410 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 KRT86O43790 486 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 URODP06132 367 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 EPB41P11171 864 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 MPLP40238 635 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 SLC11A1P49279 550 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 SLC26A2P50443 739 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 CRYBB1P53674 252 aaPredicted RBP12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 MCCD1P59942 119 aaPredicted RBP12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 PRKCEQ02156 737 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 CYP4A11Q02928 519 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 PPP2R5AQ15172 486 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 CCDC40Q4G0X9 1142 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 C10orf76Q5T2E6 689 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 ZNF720Q7Z2F6 126 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 ZNF598Q86UK7 904 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 C12orf56Q8IXR9 622 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 KIAA0319LQ8IZA0 1049 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 C17orf53Q8N3J3 647 aaPredicted RBP12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 DYDC2Q96IM9 177 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 EIF3CQ99613 913 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 SH2D3AQ9BRG2 576 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 ADAMTS10Q9H324 1103 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 NRDE2Q9H7Z3 1164 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 LMAN1LQ9HAT1 526 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 VPS45Q9NRW7 570 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 ZDHHC7Q9NXF8 308 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 CEP72Q9P209 647 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 STK39Q9UEW8 545 aa12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 ARMCX3Q9UH62 379 aaPredicted RBP12.92□□□□□ -0.34
RBFOX1-214ENST00000552089 RIOK3O14730 519 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 HBP1O60381 514 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 STBD1O95210 358 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 NDUFA10O95299 355 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 SLU7O95391 586 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 OATP04181 439 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 CAPNS1P04632 268 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 CCDC172P0C7W6 258 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 CSRP1P21291 193 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 KLRC1P26715 233 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 CASQ1P31415 396 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 PSMC2P35998 433 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 CTTNQ14247 550 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 SPA17Q15506 151 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 TRIM65Q6PJ69 517 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 USP37Q86T82 979 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 NEK11Q8NG66 645 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 FGF13Q92913 245 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 PCMTD1Q96MG8 357 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 RPS6KC1Q96S38 1066 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 LXNQ9BS40 222 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 GBP3Q9H0R5 595 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 DNAJB4Q9UDY4 337 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 SIK3Q9Y2K2 1263 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 ATP8B3O60423 1300 aa12.91□□□□□ -0.34
RBFOX1-214ENST00000552089 CFAP46Q8IYW2 2715 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 USP27XA6NNY8 438 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 K7ESF4 209 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 MAN2B1O00754 1011 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 ZBTB39O15060 712 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 PMM2O15305 246 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 P4HA2O15460 535 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 USO1O60763 962 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 C1QL1O75973 258 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 LCA5LO95447 670 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 NR2F2P24468 414 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 RAP1GAPP47736 663 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 SMTNP53814 917 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 NTHL1P78549 312 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 CETN1Q12798 172 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 GRASPQ7Z6J2 395 aaPredicted RBP12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 MYCT1Q8N699 235 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 HDAC7Q8WUI4 952 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 CPLX3Q8WVH0 158 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 CCDC42Q96M95 316 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 CCDC43Q96MW1 224 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 NTPCRQ9BSD7 190 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 PLEKHA4Q9H4M7 779 aa12.9□□□□□ -0.34
RBFOX1-214ENST00000552089 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms