RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PIDD1Q9HB75 910 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 CYP4F11Q9HBI6 524 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 TMEM8AQ9HCN3 771 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 ZDHHC7Q9NXF8 308 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 DDX43Q9NXZ2 648 aaKnown RBP11.39□□□□□ -0.59
PTCH1-225ENST00000551845 NXF1Q9UBU9 619 aaKnown RBP11.39□□□□□ -0.59
PTCH1-225ENST00000551845 AFF4Q9UHB7 1163 aaKnown RBP11.39□□□□□ -0.59
PTCH1-225ENST00000551845 FBXW11Q9UKB1 542 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 L1RE1Q9UN81 338 aa11.39□□□□□ -0.59
PTCH1-225ENST00000551845 MYO7AQ13402 2215 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 WDR27A2RRH5 827 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 GABRDO14764 452 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 RFPL2O75678 378 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 C8AP07357 584 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 HNRNPA1P09651 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTCH1-225ENST00000551845 CCDC192P0DO97 292 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 PCSK1P29120 753 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 GNL1P36915 607 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-225ENST00000551845 TSPY1Q01534 308 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 ADCY1Q08828 1119 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 CETN1Q12798 172 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 CBX2Q14781 532 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-225ENST00000551845 ZNF699Q32M78 642 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 WDR44Q5JSH3 913 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 RBM43Q6ZSC3 357 aaKnown RBP11.38□□□□□ -0.59
PTCH1-225ENST00000551845 TCEAL8Q8IYN2 117 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 ADGRF2Q8IZF7 708 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 FBXL6Q8N531 539 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 OR6B3Q8NGW1 331 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 PRKD2Q9BZL6 878 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 ZCWPW1Q9H0M4 648 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 XYLT2Q9H1B5 865 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 IRF2BPLQ9H1B7 796 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 SNX25Q9H3E2 840 aa11.38□□□□□ -0.59
PTCH1-225ENST00000551845 USP15Q9Y4E8 981 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-225ENST00000551845 XYLBO75191 536 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 TACC1O75410 805 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 LETM1O95202 739 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-225ENST00000551845 VNN1O95497 513 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 HLA-DRAP01903 254 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 LRG1P02750 347 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 PDGFRBP09619 1106 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 OR4Q2P0C623 313 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 WARSP23381 471 aaKnown RBP11.37□□□□□ -0.59
PTCH1-225ENST00000551845 HOXA9P31269 272 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 PIK3CAP42336 1068 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 TUFMP49411 452 aaKnown RBP11.37□□□□□ -0.59
PTCH1-225ENST00000551845 ZXDAP98168 799 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 NFE2Q16621 373 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-225ENST00000551845 DPCR1Q3MIW9 517 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 LIMS2Q7Z4I7 341 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 FBXL13Q8NEE6 735 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 OR10T2Q8NGX3 314 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 SLC7A14Q8TBB6 771 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 TAS1R2Q8TE23 839 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 C2orf15Q8WU43 125 aaKnown RBP11.37□□□□□ -0.59
PTCH1-225ENST00000551845 SUSD6Q92537 303 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 SMG7Q92540 1137 aaKnown RBP11.37□□□□□ -0.59
PTCH1-225ENST00000551845 PGLYRP2Q96PD5 576 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 PHF7Q9BWX1 381 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-225ENST00000551845 RHOBTB2Q9BYZ6 727 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 ANO10Q9NW15 660 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 RAB20Q9NX57 234 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 HSFX1Q9UBD0 423 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 CDH9Q9ULB4 789 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 POLIQ9UNA4 740 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 WDFY4Q6ZS81 3184 aa11.37□□□□□ -0.59
PTCH1-225ENST00000551845 KMT2EQ8IZD2 1858 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 TECTAO75443 2155 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 A8MXQ7 604 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 N4BP1O75113 896 aaKnown RBP11.36□□□□□ -0.59
PTCH1-225ENST00000551845 SEC24AO95486 1093 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 ASS1P00966 412 aaKnown RBP11.36□□□□□ -0.59
PTCH1-225ENST00000551845 WEE2P0C1S8 567 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 PTPN2P17706 415 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 LMO2P25791 158 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 ALDH1A3P47895 512 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 MXI1P50539 228 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 MARSP56192 900 aaKnown RBP11.36□□□□□ -0.59
PTCH1-225ENST00000551845 DUSP4Q13115 394 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 MAPRE1Q15691 268 aaKnown RBP11.36□□□□□ -0.59
PTCH1-225ENST00000551845 KLHL40Q2TBA0 621 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 SKOR2Q2VWA4 1001 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-225ENST00000551845 SLC39A12Q504Y0 691 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 IQCEQ6IPM2 695 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 LRRTM3Q86VH5 581 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 ELMOD1Q8N336 334 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 ATAD1Q8NBU5 361 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 SPPL2BQ8TCT7 592 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 SLC35C1Q96A29 364 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 FAXDC2Q96IV6 333 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 ZNF512Q96ME7 567 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-225ENST00000551845 TMEM209Q96SK2 561 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 RTP3Q9BQQ7 232 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 MRPL45Q9BRJ2 306 aaKnown RBP11.36□□□□□ -0.59
PTCH1-225ENST00000551845 TMEM63CQ9P1W3 806 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 GTF3C4Q9UKN8 822 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms