RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 HOXA9P31269 272 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 C1orf220Q5T0J3 134 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 TMC5Q6UXY8 1006 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 SV2AQ7L0J3 742 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 FILIP1Q7Z7B0 1213 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 GPR149Q86SP6 731 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 PDCL2Q8N4E4 241 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 TMEM105Q8N8V8 129 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 APOL5Q9BWW9 433 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 ARMCX3Q9UH62 379 aaPredicted RBP18.59■□□□□ 0.57
CDK4-208ENST00000551706 AFF4Q9UHB7 1163 aaKnown RBP18.59■□□□□ 0.57
CDK4-208ENST00000551706 L1RE1Q9UN81 338 aa18.59■□□□□ 0.57
CDK4-208ENST00000551706 CCDC195A0A1B0GUA6 201 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 GNA14O95837 355 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 HNRNPA1P09651 372 aaKnown RBP eCLIP18.58■□□□□ 0.56
CDK4-208ENST00000551706 FAM163BP0C2L3 166 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 LHX1P48742 406 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 MYL6P60660 151 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 TNNC1P63316 161 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 SMARCB1Q12824 385 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 GPR17Q13304 367 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 SGSM1Q2NKQ1 1148 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 PPM1LQ5SGD2 360 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 SCARA3Q6AZY7 606 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 TAF4BQ92750 862 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 DUSP9Q99956 384 aaKnown RBP18.58■□□□□ 0.56
CDK4-208ENST00000551706 XYLT2Q9H1B5 865 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 TMEM8AQ9HCN3 771 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 RWDD2AQ9UIY3 292 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 ZNF292O60281 2723 aa18.58■□□□□ 0.56
CDK4-208ENST00000551706 SCN1AP35498 2009 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 CACNA1BQ00975 2339 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 PRRG1O14668 218 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 RFPL2O75678 378 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 POU2F2P09086 479 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 TRIM49P0CI25 452 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 TRIM49CP0CI26 452 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 P4HA1P13674 534 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 GCLMP48507 274 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 NLRP12P59046 1061 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 MYL7Q01449 175 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 TSPY1Q01534 308 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 SOWAHAQ2M3V2 549 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 ZNF699Q32M78 642 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 WDR72Q3MJ13 1102 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 RBM43Q6ZSC3 357 aaKnown RBP18.57■□□□□ 0.56
CDK4-208ENST00000551706 LIMS2Q7Z4I7 341 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 TCEAL8Q8IYN2 117 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 UBALD2Q8IYN6 164 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 ADGRF2Q8IZF7 708 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 SLC7A14Q8TBB6 771 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 MMS19Q96T76 1030 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 PRKD2Q9BZL6 878 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 IMPG2Q9BZV3 1241 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 CYP4F11Q9HBI6 524 aa18.57■□□□□ 0.56
CDK4-208ENST00000551706 GABRDO14764 452 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 XYLBO75191 536 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 CLSTN1O94985 981 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 PCSK1P29120 753 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 PIK3CAP42336 1068 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 STX17P56962 302 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 PPP3CAQ08209 521 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 MTMR3Q13615 1198 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 CCDC40Q4G0X9 1142 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 ZNF667Q5HYK9 610 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 CT47A1Q5JQC4 288 aaPredicted RBP18.56■□□□□ 0.56
CDK4-208ENST00000551706 CCDC183Q5T5S1 534 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 TCERG1LQ5VWI1 586 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 KRT39Q6A163 491 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 DCP1BQ8IZD4 617 aaKnown RBP18.56■□□□□ 0.56
CDK4-208ENST00000551706 CCDC150Q8NCX0 1101 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 OR10T2Q8NGX3 314 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 C2orf15Q8WU43 125 aaKnown RBP18.56■□□□□ 0.56
CDK4-208ENST00000551706 SMG7Q92540 1137 aaKnown RBP18.56■□□□□ 0.56
CDK4-208ENST00000551706 RTP3Q9BQQ7 232 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 ACBD6Q9BR61 282 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 ZCWPW1Q9H0M4 648 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 PIDD1Q9HB75 910 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 DDX43Q9NXZ2 648 aaKnown RBP18.56■□□□□ 0.56
CDK4-208ENST00000551706 SORCS3Q9UPU3 1222 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 DNAH14Q0VDD8 3507 aa18.56■□□□□ 0.56
CDK4-208ENST00000551706 MED19A0JLT2 244 aaPredicted RBP18.55■□□□□ 0.56
CDK4-208ENST00000551706 TACC1O75410 805 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 VNN1O95497 513 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 HLA-DRAP01903 254 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 OR4Q2P0C623 313 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 PTMSP20962 102 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 WARSP23381 471 aaKnown RBP18.55■□□□□ 0.56
CDK4-208ENST00000551706 MXI1P50539 228 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 ADCY1Q08828 1119 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 DCAF17Q5H9S7 520 aaPredicted RBP18.55■□□□□ 0.56
CDK4-208ENST00000551706 RNF19BQ6ZMZ0 732 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 ZNF707Q96C28 371 aaPredicted RBP18.55■□□□□ 0.56
CDK4-208ENST00000551706 HSFX1Q9UBD0 423 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 NXF1Q9UBU9 619 aaKnown RBP18.55■□□□□ 0.56
CDK4-208ENST00000551706 DMXL1Q9Y485 3027 aa18.55■□□□□ 0.56
CDK4-208ENST00000551706 ASS1P00966 412 aaKnown RBP18.54■□□□□ 0.56
CDK4-208ENST00000551706 LRG1P02750 347 aa18.54■□□□□ 0.56
CDK4-208ENST00000551706 SP100P23497 879 aaPredicted RBP18.54■□□□□ 0.56
CDK4-208ENST00000551706 ERCC5P28715 1186 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms