RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 ATF2P15336 505 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 HOXB8P17481 243 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 ASPAP45381 313 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 SLC39A12Q504Y0 691 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 TCP11X2Q5H9J9 407 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 WDR44Q5JSH3 913 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 CDKAL1Q5VV42 579 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 TPGS2Q68CL5 300 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 FAM114A1Q8IWE2 563 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 AOPEPQ8N6M6 819 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 TTC9BQ8N6N2 239 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 ATAD1Q8NBU5 361 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 LMO3Q8TAP4 145 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 ACBD6Q9BR61 282 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 TUBGCP2Q9BSJ2 902 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 IMPG2Q9BZV3 1241 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 HSD3B7Q9H2F3 369 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 CRISPLD1Q9H336 500 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 PLEKHA4Q9H4M7 779 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 CYP4F11Q9HBI6 524 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 DZANK1Q9NVP4 752 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 GTF3C4Q9UKN8 822 aa16.22■□□□□ 0.19
SMARCD1-211ENST00000551497 UNC80Q8N2C7 3258 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 SPDYE4A6NLX3 237 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 PMM2O15305 246 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 N4BP1O75113 896 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 ZMYND10O75800 440 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 C8AP07357 584 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 ELF1P32519 619 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 PSMC1P62191 440 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 MYL5Q02045 173 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 DUSP4Q13115 394 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 DHX40Q8IX18 779 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 CCDC150Q8NCX0 1101 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 EHBP1Q8NDI1 1231 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 SLC7A14Q8TBB6 771 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 SPATA18Q8TC71 538 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 HDAC7Q8WUI4 952 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 PKMYT1Q99640 499 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 ARID3AQ99856 593 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 BCO2Q9BYV7 579 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 NAT10Q9H0A0 1025 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 ADAM7Q9H2U9 754 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 DPEP3Q9H4B8 488 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 CRTAC1Q9NQ79 661 aa16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 AFF4Q9UHB7 1163 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-211ENST00000551497 DOCK6Q96HP0 2047 aa16.21■□□□□ 0.18
SMARCD1-211ENST00000551497 MTMR11A4FU01 709 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 PRRG1O14668 218 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 MBTPS2O43462 519 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 P4HA1P13674 534 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 PCSK1P29120 753 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 ZNF165P49910 485 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 MRPS5P82675 430 aaKnown RBP16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 TSPY1Q01534 308 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 ORC1Q13415 861 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 MAN2A1Q16706 1144 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 VWA3BQ502W6 1294 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 INTS6LQ5JSJ4 861 aaKnown RBP16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 MIIPQ5JXC2 388 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 PPM1LQ5SGD2 360 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 LIN9Q5TKA1 542 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 PTCRAQ6ISU1 281 aaPredicted RBP16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 TCEAL8Q8IYN2 117 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 DCP1BQ8IZD4 617 aaKnown RBP16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 SMRP1Q8NCR6 262 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 ATXN2LQ8WWM7 1075 aaKnown RBP16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 ZNF707Q96C28 371 aaPredicted RBP16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 ASB2Q96Q27 587 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 SYT15Q9BQS2 421 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 NIF3L1Q9GZT8 377 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 SFXN1Q9H9B4 322 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 TAB2Q9NYJ8 693 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 DPP7Q9UHL4 492 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 CDH9Q9ULB4 789 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 USP15Q9Y4E8 981 aaPredicted RBP16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 CUL9Q8IWT3 2517 aa16.2■□□□□ 0.18
SMARCD1-211ENST00000551497 A8MXQ7 604 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 P4HA2O15460 535 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 CCL16O15467 120 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 SOAT2O75908 522 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 BMP1P13497 986 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 PRKCSHP14314 528 aaPredicted RBP16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 PTPN1P18031 435 aaKnown RBP16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 CD58P19256 250 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 SLC9A1P19634 815 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 EEF1GP26641 437 aaKnown RBP16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 NDST1P52848 882 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 IQCB1Q15051 598 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 UVSSAQ2YD98 709 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 FAM171BQ6P995 826 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 GPR149Q86SP6 731 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 BPIFA3Q9BQP9 254 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 VPS16Q9H269 839 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 NDST4Q9H3R1 872 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 CYP3A43Q9HB55 503 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 HMGXB4Q9UGU5 601 aa16.19■□□□□ 0.18
SMARCD1-211ENST00000551497 TCF20Q9UGU0 1960 aaKnown RBP16.18■□□□□ 0.18
SMARCD1-211ENST00000551497 IL9P15248 144 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms