RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ACBD6Q9BR61 282 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 GTPBP4Q9BZE4 634 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 GDE1Q9NZC3 331 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 SLC27A5Q9Y2P5 690 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 ARIH1Q9Y4X5 557 aaPredicted RBP18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 NUMBLQ9Y6R0 609 aa18.49■□□□□ 0.55
CHMP1A-208ENST00000550102 MAPK13O15264 365 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 RPL13P26373 211 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 TUFMP49411 452 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 TNNC1P63316 161 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 VEPH1Q14D04 833 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 NFE2Q16621 373 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 MGAT5BQ3V5L5 792 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 ZCWPW2Q504Y3 356 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 INTS6LQ5JSJ4 861 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 ZNF658Q5TYW1 1059 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 LIMS2Q7Z4I7 341 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 SUGP1Q8IWZ8 645 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 SMYD4Q8IYR2 804 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 SPATA20Q8TB22 786 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 TMC2Q8TDI7 906 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 ZNF516Q92618 1163 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 SYAP1Q96A49 352 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 PBXIP1Q96AQ6 731 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 MMS19Q96T76 1030 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 DNAJC25Q9H1X3 360 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 ASB3Q9Y575 518 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 PCDHB5Q9Y5E4 795 aa18.48■□□□□ 0.55
CHMP1A-208ENST00000550102 GREB1Q4ZG55 1949 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 GABRDO14764 452 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 SOAT2O75908 522 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 MICAL2O94851 1124 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 CLSTN1O94985 981 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 STAU1O95793 577 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 MYL4P12829 197 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 ACAT1P24752 427 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 ATICP31939 592 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 EDRF1Q3B7T1 1238 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 TDRD10Q5VZ19 366 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 ITIH5Q86UX2 942 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 LRRTM3Q86VH5 581 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 OSTM1Q86WC4 334 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 HS6ST3Q8IZP7 471 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 KBTBD7Q8WVZ9 684 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 TCEAL4Q96EI5 215 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 ABCB6Q9NP58 842 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 PCDHA5Q9Y5H7 936 aa18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 ZNF638Q14966 1978 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-208ENST00000550102 GADD45BO75293 160 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 SRFP11831 508 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 KRT13P13646 458 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 ATF6P18850 670 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 WARSP23381 471 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 CCR2P41597 374 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 CDR1P51861 262 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 MYL6P60660 151 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 NCOA4Q13772 614 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 ZNF699Q32M78 642 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 COBLL1Q53SF7 1204 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 PARM1Q6UWI2 310 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 INTS8Q75QN2 995 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 TMC8Q8IU68 726 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 ELOA2Q8IYF1 753 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 FAM186BQ8IYM0 893 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 SLC44A3Q8N4M1 653 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 FBXL6Q8N531 539 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 FAM200AQ8TCP9 573 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 ERCC4Q92889 916 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 FGF14Q92915 247 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 PSMG2Q969U7 264 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 SYT15Q9BQS2 421 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 XYLT2Q9H1B5 865 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 TMLHEQ9NVH6 421 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 FBXL21Q9UKT6 434 aa18.46■□□□□ 0.55
CHMP1A-208ENST00000550102 NARSO43776 548 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 AKAP3O75969 853 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 FGF19O95750 216 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 CST3P01034 146 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 HAPLN1P10915 354 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 PRCPP42785 496 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 VAMP7P51809 220 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 DLG4P78352 724 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 WDR72Q3MJ13 1102 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 MCRS1Q96EZ8 462 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 PKMYT1Q99640 499 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 TSG101Q99816 390 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 KXD1Q9BQD3 176 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 SNX25Q9H3E2 840 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 VRTNQ9H8Y1 702 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 CDH9Q9ULB4 789 aa18.45■□□□□ 0.54
CHMP1A-208ENST00000550102 IKBKBO14920 756 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 HCRTO43612 131 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 TACC1O75410 805 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 PSMC2P35998 433 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 PIK3CAP42336 1068 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 ENPEPQ07075 957 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 ADAM9Q13443 819 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 STIM1Q13586 685 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 MAPRE1Q15691 268 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 ZACNQ401N2 412 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms