RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 ALDH1A3P47895 512 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 SGSM1Q2NKQ1 1148 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 PABPC1LQ4VXU2 614 aaKnown RBP27.8■■■□□ 2.04
CPSF6-205ENST00000550075 IQCEQ6IPM2 695 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 LIMS2Q7Z4I7 341 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 RNF135Q8IUD6 432 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 ZDHHC14Q8IZN3 488 aa27.8■■■□□ 2.04
CPSF6-205ENST00000550075 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.8■■■□□ 2.04
CPSF6-205ENST00000550075 NXF1Q9UBU9 619 aaKnown RBP27.8■■■□□ 2.04
CPSF6-205ENST00000550075 TACC1O75410 805 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 GCLMP48507 274 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 TUFMP49411 452 aaKnown RBP27.79■■■□□ 2.04
CPSF6-205ENST00000550075 TWF1Q12792 350 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 DUSP4Q13115 394 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 INTS6LQ5JSJ4 861 aaKnown RBP27.79■■■□□ 2.04
CPSF6-205ENST00000550075 C1orf220Q5T0J3 134 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 GET4Q7L5D6 327 aaPredicted RBP27.79■■■□□ 2.04
CPSF6-205ENST00000550075 ATAD1Q8NBU5 361 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 CCDC150Q8NCX0 1101 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 SNX25Q9H3E2 840 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 METTL14Q9HCE5 456 aaKnown RBP27.79■■■□□ 2.04
CPSF6-205ENST00000550075 TMEM8AQ9HCN3 771 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 ARMCX3Q9UH62 379 aaPredicted RBP27.79■■■□□ 2.04
CPSF6-205ENST00000550075 PCDHB5Q9Y5E4 795 aa27.79■■■□□ 2.04
CPSF6-205ENST00000550075 VNN1O95497 513 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 VNN2O95498 520 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 HLA-DRAP01903 254 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 PTPN2P17706 415 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 MXI1P50539 228 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 EPHB3P54753 998 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 TCERG1LQ5VWI1 586 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 TTI2Q6NXR4 508 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 OSTM1Q86WC4 334 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 KBTBD7Q8WVZ9 684 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 ZNF512Q96ME7 567 aaPredicted RBP27.78■■■□□ 2.04
CPSF6-205ENST00000550075 MMRN2Q9H8L6 949 aa27.78■■■□□ 2.04
CPSF6-205ENST00000550075 ABI2Q9NYB9 513 aaPredicted RBP27.78■■■□□ 2.04
CPSF6-205ENST00000550075 ZFP37Q9Y6Q3 630 aaPredicted RBP27.78■■■□□ 2.04
CPSF6-205ENST00000550075 DCXO43602 365 aa27.77■■■□□ 2.04
CPSF6-205ENST00000550075 ALADP13716 330 aa27.77■■■□□ 2.04
CPSF6-205ENST00000550075 MCCD1P59942 119 aaPredicted RBP27.77■■■□□ 2.04
CPSF6-205ENST00000550075 PPP3CAQ08209 521 aa27.77■■■□□ 2.04
CPSF6-205ENST00000550075 MAPRE1Q15691 268 aaKnown RBP27.77■■■□□ 2.04
CPSF6-205ENST00000550075 DCAF17Q5H9S7 520 aaPredicted RBP27.77■■■□□ 2.04
CPSF6-205ENST00000550075 KRT39Q6A163 491 aa27.77■■■□□ 2.04
CPSF6-205ENST00000550075 LEMD2Q8NC56 503 aa27.77■■■□□ 2.04
CPSF6-205ENST00000550075 SEPT5Q99719 369 aaPredicted RBP27.77■■■□□ 2.04
CPSF6-205ENST00000550075 SYT15Q9BQS2 421 aa27.77■■■□□ 2.04
CPSF6-205ENST00000550075 DNMT3BQ9UBC3 853 aaKnown RBP27.77■■■□□ 2.04
CPSF6-205ENST00000550075 CDH9Q9ULB4 789 aa27.77■■■□□ 2.04
CPSF6-205ENST00000550075 ACAT1P24752 427 aaKnown RBP27.76■■■□□ 2.03
CPSF6-205ENST00000550075 VEPH1Q14D04 833 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 MGAT5BQ3V5L5 792 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 CCDC40Q4G0X9 1142 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 FILIP1Q7Z7B0 1213 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 MLKLQ8NB16 471 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 OR6B3Q8NGW1 331 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 CORO1BQ9BR76 489 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 ABCB6Q9NP58 842 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 AVENQ9NQS1 362 aaPredicted RBP27.76■■■□□ 2.03
CPSF6-205ENST00000550075 HCFC1R1Q9NWW0 138 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 SLC27A5Q9Y2P5 690 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 ASB3Q9Y575 518 aa27.76■■■□□ 2.03
CPSF6-205ENST00000550075 FGFR1OPO95684 399 aaKnown RBP27.75■■■□□ 2.03
CPSF6-205ENST00000550075 MBD3O95983 291 aa27.75■■■□□ 2.03
CPSF6-205ENST00000550075 ASS1P00966 412 aaKnown RBP27.75■■■□□ 2.03
CPSF6-205ENST00000550075 RHOP08100 348 aa27.75■■■□□ 2.03
CPSF6-205ENST00000550075 NTHL1P78549 312 aa27.75■■■□□ 2.03
CPSF6-205ENST00000550075 CYP4A22Q5TCH4 519 aa27.75■■■□□ 2.03
CPSF6-205ENST00000550075 C4orf50Q6ZRC1 276 aa27.75■■■□□ 2.03
CPSF6-205ENST00000550075 PDZD4Q76G19 769 aaPredicted RBP27.75■■■□□ 2.03
CPSF6-205ENST00000550075 ITIH5Q86UX2 942 aa27.75■■■□□ 2.03
CPSF6-205ENST00000550075 LRRTM3Q86VH5 581 aa27.75■■■□□ 2.03
CPSF6-205ENST00000550075 DUSP9Q99956 384 aaKnown RBP27.75■■■□□ 2.03
CPSF6-205ENST00000550075 MRPL45Q9BRJ2 306 aaKnown RBP27.75■■■□□ 2.03
CPSF6-205ENST00000550075 CRISPLD1Q9H336 500 aa27.75■■■□□ 2.03
CPSF6-205ENST00000550075 ASAH2Q9NR71 780 aa27.75■■■□□ 2.03
CPSF6-205ENST00000550075 MRPS23Q9Y3D9 190 aaKnown RBP27.75■■■□□ 2.03
CPSF6-205ENST00000550075 DOCK8Q8NF50 2099 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 DOCK6Q96HP0 2047 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 ZNF197O14709 1029 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 GNA14O95837 355 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 GNL1P36915 607 aaPredicted RBP27.74■■■□□ 2.03
CPSF6-205ENST00000550075 STX17P56962 302 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 SCARA5Q6ZMJ2 495 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 FRMD5Q7Z6J6 570 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 SPATA2LQ8IUW3 424 aaPredicted RBP27.74■■■□□ 2.03
CPSF6-205ENST00000550075 TTC9BQ8N6N2 239 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 FUBP3Q96I24 572 aaKnown RBP eCLIP27.74■■■□□ 2.03
CPSF6-205ENST00000550075 SMYD3Q9H7B4 428 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 EPS15L1Q9UBC2 864 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 DACH1Q9UI36 760 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 MUTYHQ9UIF7 546 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 RWDD2AQ9UIY3 292 aa27.74■■■□□ 2.03
CPSF6-205ENST00000550075 NOP14P78316 857 aaKnown RBP27.73■■■□□ 2.03
CPSF6-205ENST00000550075 FAM200AQ8TCP9 573 aa27.73■■■□□ 2.03
CPSF6-205ENST00000550075 TAS1R2Q8TE23 839 aa27.73■■■□□ 2.03
CPSF6-205ENST00000550075 MYADMQ96S97 322 aa27.73■■■□□ 2.03
CPSF6-205ENST00000550075 CEP72Q9P209 647 aa27.73■■■□□ 2.03
CPSF6-205ENST00000550075 GTF3C4Q9UKN8 822 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms