RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 CASQ1P31415 396 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 AARSP49588 968 aaKnown RBP eCLIP12.89□□□□□ -0.35
CACNB3-213ENST00000550064 NAP1L1P55209 391 aaKnown RBP12.89□□□□□ -0.35
CACNB3-213ENST00000550064 GPC5P78333 572 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 CENPCQ03188 943 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 CNGA2Q16280 664 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 TIGD5Q53EQ6 642 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 SGO2Q562F6 1265 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 WSCD1Q658N2 575 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 MFSD5Q6N075 450 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 NPAS4Q8IUM7 802 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 COLGALT2Q8IYK4 626 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 ADGRF2Q8IZF7 708 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 ABI1Q8IZP0 508 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 WDTC1Q8N5D0 677 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 KIF18AQ8NI77 898 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 NOX5Q96PH1 765 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 FAM193BQ96PV7 902 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-213ENST00000550064 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 CAPN6Q9Y6Q1 641 aa12.89□□□□□ -0.35
CACNB3-213ENST00000550064 I3L4J1 428 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 O00370 1275 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 B3GAT3O94766 335 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 MICAL2O94851 1124 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 LSM8O95777 96 aaKnown RBP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 CSF2RAP15509 400 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 PAX3P23760 479 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 CDH5P33151 784 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 NSFP46459 744 aaKnown RBP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 BRCC3P46736 316 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 RNASELQ05823 741 aaKnown RBP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 PHF13Q86YI8 300 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 MCOLN2Q8IZK6 566 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 CRYBG2Q8N1P7 616 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 C12orf29Q8N999 325 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 TMEM35BQ8NCS4 154 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 SLC35G2Q8TBE7 412 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 ZNF653Q96CK0 615 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 LPIN3Q9BQK8 851 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 LHX5Q9H2C1 402 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 DNAJB4Q9UDY4 337 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 STXBP5LQ9Y2K9 1186 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 TIMM13Q9Y5L4 95 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-213ENST00000550064 ALPK3Q96L96 1907 aa12.88□□□□□ -0.35
CACNB3-213ENST00000550064 FNDC1Q4ZHG4 1894 aaPredicted RBP12.87□□□□□ -0.35
CACNB3-213ENST00000550064 ABHD14A-ACY1A0A1B0GW23 586 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 TBKBP1A7MCY6 615 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 F8W810 466 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 M0QZQ0 153 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 GABRDO14764 452 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 ATMINO43313 823 aaPredicted RBP12.87□□□□□ -0.35
CACNB3-213ENST00000550064 UPP2O95045 317 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 KIF4AO95239 1232 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 CYP1A2P05177 515 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 ITGB1P05556 798 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 ACRP10323 421 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 OR1G1P47890 313 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 TCEAL1Q15170 157 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 STILQ15468 1287 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 PPP1R2P3Q6NXS1 205 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 LCLAT1Q6UWP7 414 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 MON1BQ7L1V2 547 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 TMEM86AQ8N2M4 240 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 C1orf131Q8NDD1 294 aaKnown RBP12.87□□□□□ -0.35
CACNB3-213ENST00000550064 TRIM58Q8NG06 486 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 HASPINQ8TF76 798 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 RFFLQ8WZ73 363 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 ZNF518BQ9C0D4 1074 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 DNAI2Q9GZS0 605 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 NRDE2Q9H7Z3 1164 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 ADAM22Q9P0K1 906 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 CTTNBP2NLQ9P2B4 639 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 CNOT8Q9UFF9 292 aaKnown RBP12.87□□□□□ -0.35
CACNB3-213ENST00000550064 GTF3C4Q9UKN8 822 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 LTBP2Q14767 1821 aa12.87□□□□□ -0.35
CACNB3-213ENST00000550064 GRID2IPA4D2P6 1211 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 TMEM189-UBE2V1I3L0A0 370 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 M0QYV0 167 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 PALMO75781 387 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 MYBL1P10243 752 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 ODC1P11926 461 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 MMP8P22894 467 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 ACAT1P24752 427 aaKnown RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 LHX1P48742 406 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 PTP4A2Q12974 167 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 IFI16Q16666 785 aaKnown RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 GOLGA7BQ2TAP0 167 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 C2CD6Q53TS8 623 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 PPP1R26Q5T8A7 1209 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-213ENST00000550064 ARHGAP17Q68EM7 881 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 MMS22LQ6ZRQ5 1243 aa12.86□□□□□ -0.35
CACNB3-213ENST00000550064 PHLDB2Q86SQ0 1253 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms