RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 SLFN14P0C7P3 912 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 MYL4P12829 197 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 CEBPBP17676 345 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 POLR2BP30876 1174 aaKnown RBP11.23□□□□□ -0.61
CCDC38-207ENST00000549752 MYL7Q01449 175 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 TCF15Q12870 199 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 PSMD2Q13200 908 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 BECN1Q14457 450 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 NFE2Q16621 373 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-207ENST00000549752 DUOXA2Q1HG44 320 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 SLC5A9Q2M3M2 681 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 TMEM259Q4ZIN3 620 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 CWF19L1Q69YN2 538 aaKnown RBP11.23□□□□□ -0.61
CCDC38-207ENST00000549752 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-207ENST00000549752 CSGALNACT2Q8N6G5 542 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 TMEM105Q8N8V8 129 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 ATOH1Q92858 354 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-207ENST00000549752 PSMG2Q969U7 264 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 FNBP1Q96RU3 617 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 SCAND2PQ9GZW5 306 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-207ENST00000549752 ZCWPW1Q9H0M4 648 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 SLITRK6Q9H5Y7 841 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 TBC1D17Q9HA65 648 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 HSPBP1Q9NZL4 362 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 AGAP1Q9UPQ3 857 aa11.23□□□□□ -0.61
CCDC38-207ENST00000549752 KRBA1A5PL33 1030 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 GOLGA8IPA6NC78 632 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 GOLGA8JA6NMD2 632 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 NCAM2O15394 837 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 KIF20AO95235 890 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 KRT19P08727 400 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 OR4Q2P0C623 313 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 NPR3P17342 541 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 CMA1P23946 247 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 PCSK1P29120 753 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 MAGEA9P43362 315 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 AFMP43652 599 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 LHX1P48742 406 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 STARD6P59095 220 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 GPC5P78333 572 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 BFSP1Q12934 665 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 PKP1Q13835 747 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 MLF2Q15773 248 aaPredicted RBP11.22□□□□□ -0.61
CCDC38-207ENST00000549752 MGAT5BQ3V5L5 792 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 SLC39A12Q504Y0 691 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 ARHGAP15Q53QZ3 475 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 ARSIQ5FYB1 569 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 WSCD1Q658N2 575 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 DPH6Q7L8W6 267 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 WDR49Q8IV35 697 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 CCDC105Q8IYK2 499 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 TOP6BLQ8N6T0 577 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 XXYLT1Q8NBI6 393 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 FAM200AQ8TCP9 573 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 DEPDC1BQ8WUY9 529 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 DNASE1L2Q92874 299 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 SMARCD2Q92925 531 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 IRF7Q92985 503 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 NELL2Q99435 816 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 KXD1Q9BQD3 176 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 ACBD6Q9BR61 282 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 FGFBP2Q9BYJ0 223 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 IKZF4Q9H2S9 585 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 PDE11AQ9HCR9 933 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 EXOC1Q9NV70 894 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 INTS13Q9NVM9 706 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 GDAP2Q9NXN4 497 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 CEP72Q9P209 647 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 MRPS17Q9Y2R5 130 aaKnown RBP11.22□□□□□ -0.61
CCDC38-207ENST00000549752 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
CCDC38-207ENST00000549752 CDC25CP30307 473 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 MRE11P49959 708 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 EHHADHQ08426 723 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 SNRNP35Q16560 246 aaKnown RBP11.21□□□□□ -0.61
CCDC38-207ENST00000549752 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.61
CCDC38-207ENST00000549752 BMT2Q1RMZ1 405 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 SLC44A4Q53GD3 710 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 ALYREFQ86V81 257 aaKnown RBP11.21□□□□□ -0.61
CCDC38-207ENST00000549752 C12orf56Q8IXR9 622 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 YAF2Q8IY57 180 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 DTWD2Q8NBA8 298 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 ATAD1Q8NBU5 361 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 OR10T2Q8NGX3 314 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 LEO1Q8WVC0 666 aaPredicted RBP11.21□□□□□ -0.61
CCDC38-207ENST00000549752 TCEAL4Q96EI5 215 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 BORCS6Q96GS4 357 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 ASB16Q96NS5 453 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 SEPT5Q99719 369 aaPredicted RBP11.21□□□□□ -0.61
CCDC38-207ENST00000549752 TRMT61BQ9BVS5 477 aaKnown RBP11.21□□□□□ -0.61
CCDC38-207ENST00000549752 OSBPL6Q9BZF3 934 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 MTMR12Q9C0I1 747 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 BRD9Q9H8M2 597 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 TRPV4Q9HBA0 871 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 PRM3Q9NNZ6 103 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 ABCB6Q9NP58 842 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 AGPAT3Q9NRZ7 376 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 SLC27A5Q9Y2P5 690 aa11.21□□□□□ -0.61
CCDC38-207ENST00000549752 PCDHB5Q9Y5E4 795 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms