RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 USTQ9Y2C2 406 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 SCN10AQ9Y5Y9 1956 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 POLR3GO15318 223 aaPredicted RBP20.27■□□□□ 0.84
BRF1-215ENST00000549655 SEPT4O43236 478 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 PSTPIP1O43586 416 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 MICAL2O94851 1124 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 RARBP10826 455 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 VDRP11473 427 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 CHRNA3P32297 505 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 TAS2R40P59535 323 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 DHX34Q14147 1143 aaKnown RBP20.27■□□□□ 0.84
BRF1-215ENST00000549655 DCUN1D2Q6PH85 259 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 C3orf20Q8ND61 904 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.27■□□□□ 0.84
BRF1-215ENST00000549655 SEC14L1Q92503 715 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 TRIM51Q9BSJ1 452 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 KLK14Q9P0G3 267 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 GTF2IRD1Q9UHL9 959 aa20.27■□□□□ 0.84
BRF1-215ENST00000549655 O00370 1275 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 KIF3CO14782 793 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 FSCN2O14926 492 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 RARAP10276 462 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 SSR1P43307 286 aaKnown RBP20.26■□□□□ 0.83
BRF1-215ENST00000549655 AARSP49588 968 aaKnown RBP eCLIP20.26■□□□□ 0.83
BRF1-215ENST00000549655 TAP1Q03518 808 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 LLGL1Q15334 1064 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 SIX1Q15475 284 aaPredicted RBP20.26■□□□□ 0.83
BRF1-215ENST00000549655 CNGA2Q16280 664 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 SGO2Q562F6 1265 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 PPP1R15BQ5SWA1 713 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 RNF39Q9H2S5 420 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 PARP2Q9UGN5 583 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 SNX9Q9Y5X1 595 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 DAPK3O43293 454 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 HMGCRP04035 888 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 ECHS1P30084 290 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 CACNB2Q08289 660 aaPredicted RBP20.26■□□□□ 0.83
BRF1-215ENST00000549655 ZNF252P-AS1Q0IIN9 211 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 CYP1B1Q16678 543 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 HSP90B2PQ58FF3 399 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 LRRC52Q8N7C0 313 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 TSEN2Q8NCE0 465 aaKnown RBP20.26■□□□□ 0.83
BRF1-215ENST00000549655 CPXM1Q96SM3 734 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 NT5C1AQ9BXI3 368 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 RAB17Q9H0T7 212 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 TJP2Q9UDY2 1190 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 LCMT1Q9UIC8 334 aa20.26■□□□□ 0.83
BRF1-215ENST00000549655 UBQLN1Q9UMX0 589 aaKnown RBP20.26■□□□□ 0.83
BRF1-215ENST00000549655 SMIM28A0A1B0GU29 152 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 FAM187AA6NFU0 413 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 M0QYV0 167 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 MRPS6P82932 125 aaKnown RBP20.25■□□□□ 0.83
BRF1-215ENST00000549655 CAP1Q01518 475 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 C9orf57Q5W0N0 161 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 GDF6Q6KF10 455 aaPredicted RBP20.25■□□□□ 0.83
BRF1-215ENST00000549655 TTC27Q6P3X3 843 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 DPH6Q7L8W6 267 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 FAM228AQ86W67 206 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 MED4Q9NPJ6 270 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 PCYOX1Q9UHG3 505 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 GOLGA8SH3BPF8 625 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 M0QZ92 97 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 AOC2O75106 756 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 PSMC1P62191 440 aaKnown RBP20.25■□□□□ 0.83
BRF1-215ENST00000549655 OGDHQ02218 1023 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 NOGQ13253 232 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 CCDC137Q6PK04 289 aaKnown RBP20.25■□□□□ 0.83
BRF1-215ENST00000549655 JAMLQ86YT9 394 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 KATNAL2Q8IYT4 538 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 MRPL45Q9BRJ2 306 aaKnown RBP20.25■□□□□ 0.83
BRF1-215ENST00000549655 DPH5Q9H2P9 285 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 SYNCQ9H7C4 482 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 KIAA1257Q9ULG3 409 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 IPPQ9Y573 584 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 CDY2AQ9Y6F7 541 aa20.25■□□□□ 0.83
BRF1-215ENST00000549655 CENPFP49454 3210 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 PDCD11Q14690 1871 aaKnown RBP20.24■□□□□ 0.83
BRF1-215ENST00000549655 GOLGA6BA6NDN3 693 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 KCNE1P15382 129 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 GJC1P36383 396 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 PTGIRP43119 386 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 GPD2P43304 727 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 NKX3-2P78367 333 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 GABPB1Q06547 395 aaPredicted RBP20.24■□□□□ 0.83
BRF1-215ENST00000549655 XKR4Q5GH76 650 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 FAM47CQ5HY64 1035 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 TWF2Q6IBS0 349 aaKnown RBP20.24■□□□□ 0.83
BRF1-215ENST00000549655 SMG8Q8ND04 991 aaKnown RBP20.24■□□□□ 0.83
BRF1-215ENST00000549655 ERP44Q9BS26 406 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 TRIM31Q9BZY9 425 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 XPNPEP3Q9NQH7 507 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 FAM114A2Q9NRY5 505 aa20.24■□□□□ 0.83
BRF1-215ENST00000549655 SIGLEC16A6NMB1 481 aa20.23■□□□□ 0.83
BRF1-215ENST00000549655 F8VP50 259 aa20.23■□□□□ 0.83
BRF1-215ENST00000549655 AGPSO00116 658 aa20.23■□□□□ 0.83
BRF1-215ENST00000549655 CD4P01730 458 aa20.23■□□□□ 0.83
BRF1-215ENST00000549655 ERBB2P04626 1255 aa20.23■□□□□ 0.83
BRF1-215ENST00000549655 KRT3P12035 628 aa20.23■□□□□ 0.83
BRF1-215ENST00000549655 ATF7P17544 494 aaPredicted RBP20.23■□□□□ 0.83
BRF1-215ENST00000549655 COILP38432 576 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms