RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 TXLNGQ9NUQ3 528 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 A0A0G2JND7 137 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 NEBLO76041 1014 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 STBD1O95210 358 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 GLRA2P23416 452 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 EPHB2P29323 1055 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 GDF10P55107 478 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 MYL6P60660 151 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 TFAMQ00059 246 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 HIF1AQ16665 826 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 WDR72Q3MJ13 1102 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 EEPD1Q7L9B9 569 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 TMEM130Q8N3G9 435 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 ALLCQ8N6M5 410 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 NSUN6Q8TEA1 469 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 UTP4Q969X6 686 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 ZNF570Q96NI8 536 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 GINM1Q9NU53 330 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 USH1CQ9Y6N9 552 aa12.57□□□□□ -0.4
RAPGEF3-219ENST00000549151 FGFR1P11362 822 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 HIRAP54198 1017 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 SESN3P58005 492 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 CXCL9Q07325 125 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 PTP4A2Q12974 167 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 PRKG1Q13976 671 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 TRIM72Q6ZMU5 477 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 ASRGL1Q7L266 308 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 FAM83AQ86UY5 434 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 PHF13Q86YI8 300 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 TTLL6Q8N841 843 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 ACTL9Q8TC94 416 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 SLC7A3Q8WY07 619 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 NKX1-2Q9UD57 310 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 TMEM191CA6NGB0 347 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 PIK3R2O00459 728 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 CST8O60676 142 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 TMEM191BP0C7N4 346 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 SRGAP2CP0DJJ0 459 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 MMP8P22894 467 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 PSMA2P25787 234 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 CTCFP49711 727 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 BASP1P80723 227 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 OTUD4Q01804 1114 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 SP2Q02086 613 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 C1QBPQ07021 282 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 C3orf62Q6ZUJ4 267 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 LONP2Q86WA8 852 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 GRAMD1AQ96CP6 724 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 GPRASP2Q96D09 838 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 SYNCQ9H7C4 482 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 MYOZ2Q9NPC6 264 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 DKC1O60832 514 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 KRT19P08727 400 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 VCPP55072 806 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 FSTL1Q12841 308 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 TAF11Q15544 211 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 MSS51Q4VC12 460 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 TAF1BQ53T94 588 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 XKR3Q5GH77 459 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 ANKRD20A2Q5SQ80 823 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 ANKRD20A1Q5TYW2 823 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 ANKRD20A3Q5VUR7 823 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 MTDHQ86UE4 582 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 PALM2Q8IXS6 379 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 RSAD2Q8WXG1 361 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 RAB3IPQ96QF0 476 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 EURLQ9NYK6 297 aa12.56□□□□□ -0.4
RAPGEF3-219ENST00000549151 COL2A1P02458 1487 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 MARK3P27448 753 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 ERFP50548 548 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 TRPC3Q13507 836 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 TFDP3Q5H9I0 405 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 OTOAQ7RTW8 1153 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 RPAINQ86UA6 219 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 THNSL1Q8IYQ7 743 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 TTC25Q96NG3 672 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 CALN1Q9BXU9 219 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 ZNF302Q9NR11 478 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 PSMC3IPQ9P2W1 217 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 CHMP2BQ9UQN3 213 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 hCG_1818297A0A087WSY0 165 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 TCRBV7S3A2A0A539 114 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 CD48P09326 243 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 RFC1P35251 1148 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 RAP1GAPP47736 663 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 FNBP1LQ5T0N5 605 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 NBPF12Q5TAG4 269 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 HSPH1Q92598 858 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 ZNF75CPQ92670 426 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 CGRRF1Q99675 332 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 CISHQ9NSE2 258 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 STARD13Q9Y3M8 1113 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 ACTL7BQ9Y614 415 aa12.55□□□□□ -0.4
RAPGEF3-219ENST00000549151 EDF1O60869 148 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-219ENST00000549151 STAM2O75886 525 aa12.54□□□□□ -0.4
RAPGEF3-219ENST00000549151 MAP3K6O95382 1288 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms