RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 SLC5A9Q2M3M2 681 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 CEP57Q86XR8 500 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 GOLGA5Q8TBA6 731 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 TMEM174Q8WUU8 243 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 ING5Q8WYH8 240 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 GSDMAQ96QA5 445 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 AVENQ9NQS1 362 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 COL4A2P08572 1712 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 ZNF233A6NK53 670 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 PDXKO00764 312 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 NFICP08651 508 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 FGFR3P22607 806 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 BRCC3P46736 316 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 SPEM2Q0P670 501 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 SURF1Q15526 300 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 TANGO2Q6ICL3 276 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 PDXDC1Q6P996 788 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 RTL10Q7L3V2 364 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 SPATA20Q8TB22 786 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 DNASE1L2Q92874 299 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 CHRDQ9H2X0 955 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 KCTD10Q9H3F6 313 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 RMND1Q9NWS8 449 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 RBAKQ9NYW8 714 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 GDE1Q9NZC3 331 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 MRPS17Q9Y2R5 130 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 MRPS23Q9Y3D9 190 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 NUB1Q9Y5A7 615 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 PCDHA5Q9Y5H7 936 aa16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.97■□□□□ 0.31
CHMP1A-206ENST00000549139 PRPF40AO75400 957 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 SMC2O95347 1197 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 RHOP08100 348 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 PAX3P23760 479 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 FCARP24071 287 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 OR1D2P34982 312 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 PPM1JQ5JR12 505 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 LAIR1Q6GTX8 287 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 EFCAB13Q8IY85 973 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 GUF1Q8N442 669 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 CELF5Q8N6W0 485 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 XXYLT1Q8NBI6 393 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 NETO1Q8TDF5 533 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 NOC3LQ8WTT2 800 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 CACTINQ8WUQ7 758 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 ELSPBP1Q96BH3 223 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 MCRS1Q96EZ8 462 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 SUSD3Q96L08 255 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 DPP3Q9NY33 737 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 MTRRQ9UBK8 725 aa16.96■□□□□ 0.31
CHMP1A-206ENST00000549139 FASNP49327 2511 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 ANO9A1A5B4 782 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 PIRO00625 290 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 NRG2O14511 850 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 SYN3O14994 580 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 LRP3O75074 770 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 RETP07949 1114 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 MCM4P33991 863 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 GUCY2FP51841 1108 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 WNT7BP56706 349 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 MYBPC2Q14324 1141 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 LPAL2Q16609 132 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 C9orf57Q5W0N0 161 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 CBWD2Q8IUF1 395 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 SLC9A9Q8IVB4 645 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 SMARCE1Q969G3 411 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 GTPBP4Q9BZE4 634 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 PDE11AQ9HCR9 933 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 DMAC2Q9NW81 257 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 TRAF3IP3Q9Y228 551 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 FRYQ5TBA9 3013 aa16.95■□□□□ 0.3
CHMP1A-206ENST00000549139 M0QZQ0 153 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 CALUO43852 315 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 CEBPBP17676 345 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 TKTP29401 623 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 AARSP49588 968 aaKnown RBP eCLIP16.94■□□□□ 0.37e-7■■■■■ 54
CHMP1A-206ENST00000549139 CYP2J2P51589 502 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 NRLP54845 237 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 SNRNP35Q16560 246 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 COBLL1Q53SF7 1204 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 PRSS36Q5K4E3 855 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 ZNF658Q5TYW1 1059 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 ANKS3Q6ZW76 656 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 TMEM130Q8N3G9 435 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 RDH13Q8NBN7 331 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 IER2Q9BTL4 223 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 BACE2Q9Y5Z0 518 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 CDY1Q9Y6F8 540 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 IGF2RP11717 2491 aa16.94■□□□□ 0.3
CHMP1A-206ENST00000549139 I3L4J1 428 aa16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 MAN2B1O00754 1011 aa16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 EXOC3O60645 756 aa16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 LILRA4P59901 499 aa16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 TFAMQ00059 246 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 MRPL58Q14197 206 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 NFIL3Q16649 462 aa16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 APPL2Q8NEU8 664 aa16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 ERCC4Q92889 916 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 INTS13Q9NVM9 706 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms