RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 DCP1AQ9NPI6 582 aaPredicted RBP4.34□□□□□ -1.71
APAF1-208ENST00000549007 FTSJ1Q9UET6 329 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 SCAF8Q9UPN6 1271 aaKnown RBP4.34□□□□□ -1.71
APAF1-208ENST00000549007 NUB1Q9Y5A7 615 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 PCDHAC2Q9Y5I4 1007 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 SCN9AQ15858 1988 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 CCDC88AQ3V6T2 1871 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 BDNFP23560 247 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 GALNT1Q10472 559 aaPredicted RBP4.34□□□□□ -1.71
APAF1-208ENST00000549007 CAVIN4Q5BKX8 364 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 ZNF804AQ7Z570 1209 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 NLRX1Q86UT6 975 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 CHD1LQ86WJ1 897 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 CERS5Q8N5B7 392 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 STPG3Q8N7X2 389 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 SUPT20HQ8NEM7 779 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 PDZD8Q8NEN9 1154 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 PHKBQ93100 1093 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 CDK5RAP3Q96JB5 506 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 RNF32Q9H0A6 362 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 NUP62CLQ9H1M0 184 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 TDP1Q9NUW8 608 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 OGDHLQ9ULD0 1010 aa4.34□□□□□ -1.71
APAF1-208ENST00000549007 A0A1W2PPL8 197 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 ZNF839A8K0R7 811 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 RNF225M0QZC1 329 aaPredicted RBP4.34□□□□□ -1.72
APAF1-208ENST00000549007 WIPF1O43516 503 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 IL18BPO95998 194 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 SUMO3P55854 103 aaPredicted RBP4.34□□□□□ -1.72
APAF1-208ENST00000549007 NUCB1Q02818 461 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 POLD3Q15054 466 aaPredicted RBP4.34□□□□□ -1.72
APAF1-208ENST00000549007 MSL3Q8N5Y2 521 aaKnown RBP4.34□□□□□ -1.72
APAF1-208ENST00000549007 GCC1Q96CN9 775 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 MYLK2Q9H1R3 596 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 ITM2CQ9NQX7 267 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 SACM1LQ9NTJ5 587 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.34□□□□□ -1.72
APAF1-208ENST00000549007 CHD4Q14839 1912 aa4.34□□□□□ -1.72
APAF1-208ENST00000549007 H0Y858 1186 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 TRIM38O00635 465 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 GMPSP49915 693 aaPredicted RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 TIGD6Q17RP2 521 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 BTNL9Q6UXG8 535 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 NFXL1Q6ZNB6 911 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 NME8Q8N427 588 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 NETO2Q8NC67 525 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 OR5AN1Q8NGI8 311 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 TOE1Q96GM8 510 aaKnown RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 APIPQ96GX9 242 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 LIN37Q96GY3 246 aaPredicted RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 PPP1R16BQ96T49 567 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 TLR9Q9NR96 1032 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 HMG20BQ9P0W2 317 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 ZFP69BQ9UJL9 534 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 GTF2A1LQ9UNN4 478 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 SLC5A6Q9Y289 635 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 M0R3H8 397 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 MX1P20591 662 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 PRDX5P30044 214 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 PDIA3P30101 505 aaKnown RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 FMO1Q01740 532 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 TNFAIP2Q03169 654 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 MFSD14BQ5SR56 506 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 TTLL5Q6EMB2 1281 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 CYP4F22Q6NT55 531 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 OTOP2Q7RTS6 562 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 KRT78Q8N1N4 520 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 TDRD7Q8NHU6 1098 aaKnown RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 TNPO1Q92973 898 aaKnown RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 FATE1Q969F0 183 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 PEX11GQ96HA9 241 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 SORBS1Q9BX66 1292 aaKnown RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 COA1Q9GZY4 146 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 OR10A5Q9H207 317 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 PIH1D3Q9NQM4 214 aaKnown RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 KMT5AQ9NQR1 393 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 RBM12Q9NTZ6 932 aaKnown RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 GALNT8Q9NY28 637 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 VAV3Q9UKW4 847 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 SBF1O95248 1867 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 AOX1Q06278 1338 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 A0A088AWK7 358 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 DYTNA2CJ06 578 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 HDCP19113 662 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 CTSSP25774 331 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 EPS15P42566 896 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 CCDC158Q5M9N0 1113 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 CENPQQ7L2Z9 268 aaPredicted RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 SPATA5Q8NB90 893 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 DYDC2Q96IM9 177 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 SAMD11Q96NU1 681 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 ZNF287Q9HBT7 754 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 KIAA1586Q9HCI6 787 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 LRFN1Q9P244 771 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 ITGB1BP2Q9UKP3 347 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 TIAM2Q8IVF5 1701 aa4.33□□□□□ -1.72
APAF1-208ENST00000549007 ASTN2O75129 1339 aaPredicted RBP4.33□□□□□ -1.72
APAF1-208ENST00000549007 AQP12BA6NM10 295 aa4.32□□□□□ -1.72
APAF1-208ENST00000549007 AMY1AP04745 511 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms