RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 DSTYKQ6XUX3 929 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 TMEM130Q8N3G9 435 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 GATA6Q92908 595 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 TCEAL3Q969E4 200 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 RUSC1Q9BVN2 902 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 HAPLN2Q9GZV7 340 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 KIF9Q9HAQ2 790 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 FBRSL1Q9HCM7 1045 aaKnown RBP14.69□□□□□ -0.06
CDX2-202ENST00000548877 PCNX2A6NKB5 2137 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 DMXL2Q8TDJ6 3036 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 LNP1A1A4G5 178 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 C4orf47A7E2U8 309 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 E9PMD0 336 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 GIPC1O14908 333 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 FAM189A1O60320 539 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 RNF40O75150 1001 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 SOAT2O75908 522 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 CAVIN2O95810 425 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 EGFP01133 1207 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 HOXB3P14651 431 aaPredicted RBP14.68□□□□□ -0.06
CDX2-202ENST00000548877 CYP4F8P98187 520 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 SMARCB1Q12824 385 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 ZNF268Q14587 947 aaPredicted RBP14.68□□□□□ -0.06
CDX2-202ENST00000548877 VEPH1Q14D04 833 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 KYAT1Q16773 422 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 TTC38Q5R3I4 469 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 SPATA1Q5VX52 437 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 ARMCX5Q6P1M9 558 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 TMEM150AQ86TG1 271 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 C11orf74Q86VG3 221 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 C2orf15Q8WU43 125 aaKnown RBP14.68□□□□□ -0.06
CDX2-202ENST00000548877 KIF12Q96FN5 646 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 SENP8Q96LD8 212 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 GCNAQ96QF7 691 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 ADAM33Q9BZ11 813 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 ZCWPW1Q9H0M4 648 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 ANKFY1Q9P2R3 1169 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 PKD1L2Q7Z442 2459 aa14.68□□□□□ -0.06
CDX2-202ENST00000548877 ASCC3Q8N3C0 2202 aaKnown RBP14.68□□□□□ -0.06
CDX2-202ENST00000548877 SCN1AP35498 2009 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 APBB3O95704 486 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 F11P03951 625 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 ODC1P11926 461 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 PLS3P13797 630 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 GALK1P51570 392 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 SPAG1Q07617 926 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 ZNF252P-AS1Q0IIN9 211 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 ACAP1Q15027 740 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 KCTD17Q8N5Z5 321 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 OR10T2Q8NGX3 314 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 SNX29Q8TEQ0 813 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 USP13Q92995 863 aaPredicted RBP14.67□□□□□ -0.06
CDX2-202ENST00000548877 EXOC4Q96A65 974 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 LPIN3Q9BQK8 851 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 RAB34Q9BZG1 259 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 SMG9Q9H0W8 520 aaKnown RBP14.67□□□□□ -0.06
CDX2-202ENST00000548877 EBF3Q9H4W6 596 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 AKAP13Q12802 2813 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 THADAQ6YHU6 1953 aa14.67□□□□□ -0.06
CDX2-202ENST00000548877 WDFY3Q8IZQ1 3526 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 ANO9A1A5B4 782 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 SFI1A8K8P3 1242 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 LACTBL1A8MY62 500 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 PIRO00625 290 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 CDX4O14627 284 aaPredicted RBP14.66□□□□□ -0.06
CDX2-202ENST00000548877 HMGA1P17096 107 aaKnown RBP14.66□□□□□ -0.06
CDX2-202ENST00000548877 FOSBP53539 338 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 SMTNP53814 917 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 NLRP12P59046 1061 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 CREB5Q02930 508 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 PPP2R3AQ06190 1150 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 ST3GAL1Q11201 340 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 PDGFRLQ15198 375 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 SH3PXD2AQ5TCZ1 1133 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 PMS2CLQ68D20 193 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 CD302Q8IX05 232 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 SPPL2BQ8TCT7 592 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 EZH1Q92800 747 aaPredicted RBP14.66□□□□□ -0.06
CDX2-202ENST00000548877 ACDQ96AP0 544 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 HHIPQ96QV1 700 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 P2RY13Q9BPV8 354 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 TDP1Q9NUW8 608 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 POLR3BQ9NW08 1133 aaPredicted RBP14.66□□□□□ -0.06
CDX2-202ENST00000548877 DSEQ9UL01 958 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 CCL26Q9Y258 94 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 PTPRDP23468 1912 aa14.66□□□□□ -0.06
CDX2-202ENST00000548877 SRRM3A6NNA2 597 aaPredicted RBP14.65□□□□□ -0.06
CDX2-202ENST00000548877 PPEF2O14830 753 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 DCLK1O15075 740 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 PIGRP01833 764 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 HAPLN1P10915 354 aaPredicted RBP14.65□□□□□ -0.06
CDX2-202ENST00000548877 SCP2P22307 547 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 CDC25AP30304 524 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 GJA4P35212 333 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 AVPR1AP37288 418 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 TNFSF9P41273 254 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 GUCY2FP51841 1108 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 FOXC1Q12948 553 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 DMC1Q14565 340 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 ENOX2Q16206 610 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms