RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 GIPC2Q8TF65 315 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 FGF14Q92915 247 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 PBXIP1Q96AQ6 731 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 KXD1Q9BQD3 176 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 RPP25Q9BUL9 199 aaKnown RBP16.93■□□□□ 0.3
DDX54-205ENST00000548786 DNAJC25Q9H1X3 360 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 MMRN2Q9H8L6 949 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 ASAH2Q9NR71 780 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 NXF1Q9UBU9 619 aaKnown RBP16.93■□□□□ 0.3
DDX54-205ENST00000548786 HOOK1Q9UJC3 728 aaKnown RBP16.93■□□□□ 0.3
DDX54-205ENST00000548786 MAFFQ9ULX9 164 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 TRAF3IP3Q9Y228 551 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 ATP2C2O75185 946 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 AKAP3O75969 853 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 PDGFRBP09619 1106 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 TRIM49P0CI25 452 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 TRIM49CP0CI26 452 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 TNNC1P63316 161 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 PLD1Q13393 1074 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 HTR4Q13639 388 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 WDR72Q3MJ13 1102 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 CYP4A22Q5TCH4 519 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 ZNF658Q5TYW1 1059 aaPredicted RBP16.92■□□□□ 0.3
DDX54-205ENST00000548786 SDHAF4Q5VUM1 108 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 POTEHQ6S545 545 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 FAM186BQ8IYM0 893 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 UBALD2Q8IYN6 164 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 TMEM86AQ8N2M4 240 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 KBTBD7Q8WVZ9 684 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 TIGD1Q96MW7 591 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 GSDMAQ96QA5 445 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 MRPL45Q9BRJ2 306 aaKnown RBP16.92■□□□□ 0.3
DDX54-205ENST00000548786 IGSF9Q9P2J2 1179 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 GTF3C4Q9UKN8 822 aa16.92■□□□□ 0.3
DDX54-205ENST00000548786 BIN1O00499 593 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 CFHP08603 1231 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 ATF6P18850 670 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 LMO2P25791 158 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 RAP1GAPP47736 663 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 GPR15P49685 360 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 ADAM9Q13443 819 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 NCOA4Q13772 614 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 ZNF699Q32M78 642 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 ZCWPW2Q504Y3 356 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 INTS6LQ5JSJ4 861 aaKnown RBP16.91■□□□□ 0.3
DDX54-205ENST00000548786 PRSS36Q5K4E3 855 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 SLC44A3Q8N4M1 653 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 ASIC4Q96FT7 647 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 ZNF334Q9HCZ1 680 aaPredicted RBP16.91■□□□□ 0.3
DDX54-205ENST00000548786 MAN1B1Q9UKM7 699 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 FBXL21Q9UKT6 434 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 PCDHB5Q9Y5E4 795 aa16.91■□□□□ 0.3
DDX54-205ENST00000548786 A0A1W2PRU2 124 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 MYBPHLA2RUH7 354 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 TRIM49BA6NDI0 452 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 VNN1O95497 513 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 KRT13P13646 458 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
DDX54-205ENST00000548786 LHX1P48742 406 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 VAMP7P51809 220 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 PMS1P54277 932 aaKnown RBP16.9■□□□□ 0.3
DDX54-205ENST00000548786 TEAD2Q15562 447 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 C1orf220Q5T0J3 134 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 GPIHBP1Q8IV16 184 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 OR6B3Q8NGW1 331 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 SYT15Q9BQS2 421 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 ACBD6Q9BR61 282 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 XYLT2Q9H1B5 865 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 SNX25Q9H3E2 840 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 SLITRK6Q9H5Y7 841 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 SMYD3Q9H7B4 428 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 DUSP12Q9UNI6 340 aa16.9■□□□□ 0.3
DDX54-205ENST00000548786 ANHXE9PGG2 379 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 ZNF197O14709 1029 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 GABRDO14764 452 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 C4BPAP04003 597 aaKnown RBP16.89■□□□□ 0.29
DDX54-205ENST00000548786 HAPLN1P10915 354 aaPredicted RBP16.89■□□□□ 0.29
DDX54-205ENST00000548786 CYP2F1P24903 491 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 PCSK1P29120 753 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
DDX54-205ENST00000548786 PIK3CAP42336 1068 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 GCLMP48507 274 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 TUFMP49411 452 aaKnown RBP16.89■□□□□ 0.29
DDX54-205ENST00000548786 VEPH1Q14D04 833 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 TAF12Q16514 161 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 CAMK4Q16566 473 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 STXBP5Q5T5C0 1151 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 KLHL10Q6JEL2 608 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 DNAJB7Q7Z6W7 309 aaPredicted RBP16.89■□□□□ 0.29
DDX54-205ENST00000548786 TMC8Q8IU68 726 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 SPATA2LQ8IUW3 424 aaPredicted RBP16.89■□□□□ 0.29
DDX54-205ENST00000548786 SPATA20Q8TB22 786 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 SHKBP1Q8TBC3 707 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 SPPL2BQ8TCT7 592 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 TMC2Q8TDI7 906 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 TMEM174Q8WUU8 243 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 SYAP1Q96A49 352 aaPredicted RBP16.89■□□□□ 0.29
DDX54-205ENST00000548786 ZSWIM3Q96MP5 696 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 TSG101Q99816 390 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms