RNA–Protein interactions for RNA: ENST00000548265.1

PACS2-207, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-207ENST00000548265 RASIP1Q5U651 963 aa16.44■□□□□ 0.22
PACS2-207ENST00000548265 FAM171A1Q5VUB5 890 aa16.44■□□□□ 0.22
PACS2-207ENST00000548265 OVOS1Q6IE37 1185 aa16.44■□□□□ 0.22
PACS2-207ENST00000548265 WDR59Q6PJI9 974 aa16.44■□□□□ 0.22
PACS2-207ENST00000548265 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.44■□□□□ 0.22
PACS2-207ENST00000548265 CEP57Q86XR8 500 aa16.44■□□□□ 0.22
PACS2-207ENST00000548265 TXLNBQ8N3L3 684 aa16.44■□□□□ 0.22
PACS2-207ENST00000548265 AGPAT1Q99943 283 aa16.44■□□□□ 0.22
PACS2-207ENST00000548265 OXCT2Q9BYC2 517 aaPredicted RBP16.44■□□□□ 0.22
PACS2-207ENST00000548265 DDX43Q9NXZ2 648 aaKnown RBP16.44■□□□□ 0.22
PACS2-207ENST00000548265 I3L4J1 428 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 PDGFRBP09619 1106 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 ZNF132P52740 706 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 RAD23BP54727 409 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 SHHQ15465 462 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 SPA17Q15506 151 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 USP41Q3LFD5 358 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 C9orf50Q5SZB4 431 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 E4F1Q66K89 784 aaPredicted RBP16.43■□□□□ 0.22
PACS2-207ENST00000548265 KIAA1841Q6NSI8 718 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 PPP1R2P3Q6NXS1 205 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 LIMS2Q7Z4I7 341 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 SLC47A2Q86VL8 602 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 SLC39A11Q8N1S5 342 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 EPS8L1Q8TE68 723 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 KBTBD7Q8WVZ9 684 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 IGSF21Q96ID5 467 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 CHP1Q99653 195 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 MARCH5Q9NX47 278 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 ARHGAP20Q9P2F6 1191 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 HCSTQ9UBK5 93 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 CDH9Q9ULB4 789 aa16.43■□□□□ 0.22
PACS2-207ENST00000548265 TIMM13Q9Y5L4 95 aaPredicted RBP16.43■□□□□ 0.22
PACS2-207ENST00000548265 ITGB1P05556 798 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 PBX3P40426 434 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 KRT83P78385 493 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 CCZ1BP86790 482 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 CCZ1P86791 482 aaPredicted RBP16.42■□□□□ 0.22
PACS2-207ENST00000548265 CDR2Q01850 454 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 MAPRE1Q15691 268 aaKnown RBP16.42■□□□□ 0.22
PACS2-207ENST00000548265 ZNF697Q5TEC3 545 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 TAF3Q5VWG9 929 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 HGSNATQ68CP4 663 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 CD300LGQ6UXG3 332 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 TRIM72Q6ZMU5 477 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 ANKS3Q6ZW76 656 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 SLC4A11Q8NBS3 891 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
PACS2-207ENST00000548265 ZNF830Q96NB3 372 aaPredicted RBP16.42■□□□□ 0.22
PACS2-207ENST00000548265 SYT15Q9BQS2 421 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 ACBD6Q9BR61 282 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 ELOVL4Q9GZR5 314 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 HESX1Q9UBX0 185 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 COL4A6Q14031 1691 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 ATP8B3O60423 1300 aa16.42■□□□□ 0.22
PACS2-207ENST00000548265 KIAA1671Q9BY89 1806 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.41■□□□□ 0.22
PACS2-207ENST00000548265 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.41■□□□□ 0.22
PACS2-207ENST00000548265 SOWAHDA6NJG2 315 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 GABRDO14764 452 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 CCP110O43303 1012 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 COL9A1P20849 921 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 TKTP29401 623 aaKnown RBP16.41■□□□□ 0.22
PACS2-207ENST00000548265 CTNNB1P35222 781 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 KIF11P52732 1056 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 ZNF571Q7Z3V5 609 aaPredicted RBP16.41■□□□□ 0.22
PACS2-207ENST00000548265 ACOT1Q86TX2 421 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 NOP9Q86U38 636 aaKnown RBP16.41■□□□□ 0.22
PACS2-207ENST00000548265 DCP1BQ8IZD4 617 aaKnown RBP16.41■□□□□ 0.22
PACS2-207ENST00000548265 CRYBG2Q8N1P7 616 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 MAFAQ8NHW3 353 aaPredicted RBP16.41■□□□□ 0.22
PACS2-207ENST00000548265 CLP1Q92989 425 aaKnown RBP16.41■□□□□ 0.22
PACS2-207ENST00000548265 FAM161BQ96MY7 647 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 SAMD11Q96NU1 681 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 TTPALQ9BTX7 342 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 MSRAQ9UJ68 235 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 SSX2IPQ9Y2D8 614 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 PCDHA11Q9Y5I1 949 aa16.41■□□□□ 0.22
PACS2-207ENST00000548265 EPN1Q9Y6I3 576 aaPredicted RBP16.41■□□□□ 0.22
PACS2-207ENST00000548265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
PACS2-207ENST00000548265 TSC2P49815 1807 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 NLRC5Q86WI3 1866 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 OR6C75A6NL08 312 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 EIF3CLB5ME19 914 aaKnown RBP16.4■□□□□ 0.22
PACS2-207ENST00000548265 F8W810 466 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 NDUFA10O95299 355 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 SOD2P04179 222 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 URODP06132 367 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 PLEKP08567 350 aaPredicted RBP16.4■□□□□ 0.22
PACS2-207ENST00000548265 PTPN1P18031 435 aaKnown RBP16.4■□□□□ 0.22
PACS2-207ENST00000548265 FGFR3P22607 806 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
PACS2-207ENST00000548265 SLC8A3P57103 927 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 RAB30Q15771 203 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 SLC18A3Q16572 532 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 CTXN3Q4LDR2 81 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 VARS2Q5ST30 1063 aaKnown RBP16.4■□□□□ 0.22
PACS2-207ENST00000548265 C10orf76Q5T2E6 689 aa16.4■□□□□ 0.22
PACS2-207ENST00000548265 DDX53Q86TM3 631 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms