RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CASP4P49662 377 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 TRPC3Q13507 836 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 SOWAHAQ2M3V2 549 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 EDRF1Q3B7T1 1238 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 ZCWPW2Q504Y3 356 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 INTS6LQ5JSJ4 861 aaKnown RBP17.05■□□□□ 0.32
DDX54-204ENST00000546898 ZNF658Q5TYW1 1059 aaPredicted RBP17.05■□□□□ 0.32
DDX54-204ENST00000546898 ITIH5Q86UX2 942 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 PLEKHO2Q8TD55 490 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 TMC2Q8TDI7 906 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 ZNF516Q92618 1163 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 SMARCE1Q969G3 411 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 SYAP1Q96A49 352 aaPredicted RBP17.05■□□□□ 0.32
DDX54-204ENST00000546898 PBXIP1Q96AQ6 731 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 MAPK8IP1Q9UQF2 711 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 SLC27A5Q9Y2P5 690 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 PCDHB5Q9Y5E4 795 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 NUMBLQ9Y6R0 609 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 OBSL1O75147 1896 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 PHACTR2O75167 634 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 CST3P01034 146 aaPredicted RBP17.04■□□□□ 0.32
DDX54-204ENST00000546898 FAM163BP0C2L3 166 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 SRFP11831 508 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 CEBPBP17676 345 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 WARSP23381 471 aaKnown RBP17.04■□□□□ 0.32
DDX54-204ENST00000546898 PLA2G5P39877 138 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 ENPEPQ07075 957 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 BIRC3Q13489 604 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 VEPH1Q14D04 833 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 CEP135Q66GS9 1140 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 INTS8Q75QN2 995 aaKnown RBP17.04■□□□□ 0.32
DDX54-204ENST00000546898 LRRTM3Q86VH5 581 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 SUGP1Q8IWZ8 645 aaKnown RBP17.04■□□□□ 0.32
DDX54-204ENST00000546898 SLC44A3Q8N4M1 653 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 FBXL6Q8N531 539 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 TTC9BQ8N6N2 239 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 RSAD2Q8WXG1 361 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 ING5Q8WYH8 240 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 PSMG2Q969U7 264 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 SEPT5Q99719 369 aaPredicted RBP17.04■□□□□ 0.32
DDX54-204ENST00000546898 SMOC2Q9H3U7 446 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 VRTNQ9H8Y1 702 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 ABCB6Q9NP58 842 aa17.04■□□□□ 0.32
DDX54-204ENST00000546898 ABI2Q9NYB9 513 aaPredicted RBP17.04■□□□□ 0.32
DDX54-204ENST00000546898 IKBKBO14920 756 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 TACC1O75410 805 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 FGF19O95750 216 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 HAPLN1P10915 354 aaPredicted RBP17.03■□□□□ 0.32
DDX54-204ENST00000546898 MYL4P12829 197 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 CCR2P41597 374 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 TNNC1P63316 161 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 MGAT5BQ3V5L5 792 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 TDRD10Q5VZ19 366 aaKnown RBP17.03■□□□□ 0.32
DDX54-204ENST00000546898 PARM1Q6UWI2 310 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 TMC8Q8IU68 726 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 SMYD4Q8IYR2 804 aaPredicted RBP17.03■□□□□ 0.32
DDX54-204ENST00000546898 HS6ST3Q8IZP7 471 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 KBTBD7Q8WVZ9 684 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 FGF14Q92915 247 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 TCEAL4Q96EI5 215 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 MMS19Q96T76 1030 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 PKMYT1Q99640 499 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 LRRC3Q9BY71 257 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
DDX54-204ENST00000546898 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
DDX54-204ENST00000546898 MUC6Q6W4X9 2439 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 GREB1Q4ZG55 1949 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 C4BPAP04003 597 aaKnown RBP17.02■□□□□ 0.32
DDX54-204ENST00000546898 ATF6P18850 670 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 ACAT1P24752 427 aaKnown RBP17.02■□□□□ 0.32
DDX54-204ENST00000546898 PSMC2P35998 433 aaKnown RBP17.02■□□□□ 0.32
DDX54-204ENST00000546898 MYL6P60660 151 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 ADAM9Q13443 819 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 ZNF699Q32M78 642 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 WDR72Q3MJ13 1102 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 ZACNQ401N2 412 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 FAM186BQ8IYM0 893 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 MCRS1Q96EZ8 462 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 FUBP3Q96I24 572 aaKnown RBP eCLIP17.02■□□□□ 0.32
DDX54-204ENST00000546898 SYT15Q9BQS2 421 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 MKNK1Q9BUB5 465 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 GPR88Q9GZN0 384 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 XYLT2Q9H1B5 865 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 KCNH6Q9H252 994 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 SLC2A4RGQ9NR83 387 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 TMLHEQ9NVH6 421 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 CDH9Q9ULB4 789 aa17.02■□□□□ 0.32
DDX54-204ENST00000546898 NARSO43776 548 aaKnown RBP17.01■□□□□ 0.31
DDX54-204ENST00000546898 GADD45BO75293 160 aaPredicted RBP17.01■□□□□ 0.31
DDX54-204ENST00000546898 MOSPD3O75425 235 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 ECI2O75521 394 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 SOAT2O75908 522 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 AKAP3O75969 853 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 KRT13P13646 458 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 PPP1R2P41236 205 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 PRCPP42785 496 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 VAMP7P51809 220 aa17.01■□□□□ 0.31
DDX54-204ENST00000546898 DLG4P78352 724 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms